| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1177 |
|---|
| Symbol | |
|---|
| ID | 5742900 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | + |
|---|
| Start bp | 1493642 |
|---|
| End bp | 1494436 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 641292282 |
|---|
| Product | class II aldolase/adducin family protein |
|---|
| Protein accession | YP_001558294 |
|---|
| Protein GI | 160879326 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
|---|
| TIGRFAM ID | [TIGR00760] L-ribulose-5-phosphate 4-epimerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0000951199 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGAAT ATGAAGTTAA AAAAGAGATA TGTGAGATAG GACGCAGAAT CTATAACAAG
GGTATGGTTG CTGCAAATGA CGGCAACATC TCTGTAAAAT TAAATGAGAA TGAGTTTTTA
TGTACACCAA CTGGAGTTAG TAAAGGATTT ATGACACCAG ATTATATATG TAAGGTAGAT
AAAGATGGTA AAGTACTTCA AGCTAATGGA ATATATAAAC CATCCTCTGA GATTAAGATG
CATATGAGAG TATACCAAGA GCGTCCAGAT GTTAATGCGG TAGTTCATGC TCATCCAATG
TATGCAACAA GTTTTGCTAT TGCAGGTATT CCTTTGACAC AGCCAATTAT GCCAGAAGCA
GTTATTTCCT TAGGTTGTGT TCCAATCGCT GAGTACGGTA CACCTTCTAC TGACGAGATT
CCAGATGCAA TTTCTAAGTA TATTCAACAT TTTGATTCTG TTTTATTAGC AAACCATGGT
GCACTAAGCT TCTCCGATTC ATTATTAAAT GCATATTTTA AGATGGAGTC AACAGAGTTT
TACGCACAGT TATTATATCA GGCAAAGGTA CTTGGAGGAC CAAAGGAGTT AAGTAATTCT
CAGGTTCAGA GATTGTATGA ATTAAGAAGA GAATTTGGAT TAAAGGGAAA ACATCCTGCT
AATCTTTGTT CCAATACCAA AGAAGGTAAA GCAAGCTGTC ATTGTTGTGG TGAAGAGTGT
AAGTCTGGTG GCGTAGATAA TGCAGATTTA GTTGCTTCCA TAACAAGAAA GGTGATGGAA
CAGCTAGGAT TATAA
|
|---|
| Protein sequence | MNEYEVKKEI CEIGRRIYNK GMVAANDGNI SVKLNENEFL CTPTGVSKGF MTPDYICKVD
KDGKVLQANG IYKPSSEIKM HMRVYQERPD VNAVVHAHPM YATSFAIAGI PLTQPIMPEA
VISLGCVPIA EYGTPSTDEI PDAISKYIQH FDSVLLANHG ALSFSDSLLN AYFKMESTEF
YAQLLYQAKV LGGPKELSNS QVQRLYELRR EFGLKGKHPA NLCSNTKEGK ASCHCCGEEC
KSGGVDNADL VASITRKVME QLGL
|
|---|
| |