Gene Cphy_1128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_1128 
Symbol 
ID5741963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp1421795 
End bp1422781 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content35% 
IMG OID641292233 
ProductABC transporter related 
Protein accessionYP_001558245 
Protein GI160879277 
COG category[R] General function prediction only 
COG ID[COG4586] ABC-type uncharacterized transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0395401 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACAGA GAATGATAAT TCAGGCAAGG AACTTATCAA AGACATTTCA AGTAAAAGAA 
AAACGTAAAG GGCTTAAGGG AAGCCTTCTC TCCATCGTAA AACCTAGCTA TAAGGAAATA
AAAGCGGTGG AGAATATTAA TTTTAATATA GCGGAAGGCG AGATTATAGC ATTCATTGGG
CCTAATGGTG CTGGAAAAAG TACCACAATT AAAATGCTAA CCGGAATTTT ATATCCAAGT
GCAGGAGACG CTTTGGTAGA AGATATTAAT CCATGCAAAA AAAGAAAACA ACTTGCCTAT
AAGATTGGTA CTGTATTTGG CCAAAAGGAG CAGTTATGGA CACATTTGAC CCCGTATGAT
AATTTTAAGT TCTTTGGAGC AGTATATGAT ATCGCTGAAG AGGAAGTAGA AGCTCGCATA
GACGAGCTAA AGAATACATT TGAACTAAGC GAGTTTATCA ATACTCCAGT GCGAAATTTG
TCTCTTGGGC AGCGGATACG ATGTGAGATA GTTGCATCAC TGATACATAA ACCCAAAATA
TTATTTTTAG ATGAGCCAAC AATTGGACTT GATCCAGTTG TTAAAGAAAA TATCCGTACC
TTGATTAAGA AGATGAACAA AGAGTTTGGT ATGACAGTTT TTTTAACTAG CCATGATGTT
GGTGATATAG AGAAATTGTG CAAGAGAATT ATTATAGTAA ATCATGGGAA GATTGTTCTC
GATGATTCAA TGGAGAAGGT AAAGTACCAT TATCTTGATA AGAAAATGAT TGAGATAAAG
ATGAAGGAGG AGACCACGCT TCCAAGAATC GAAGGTGTTA CAGTACTTAA AAGTAAGGGT
GTGAATTTAA AGCTTGAAGT AGATACGAAG GTAATTAGTA TTCAAGAGGT TTTAAAGTGG
CTTGATACAG ATAACTTGAT GGACATTACT ATTTCCAATG TACCACTTGA GAAAATAATA
ACTCAAATTT ATAAGGAAAG AGGTTAA
 
Protein sequence
MEQRMIIQAR NLSKTFQVKE KRKGLKGSLL SIVKPSYKEI KAVENINFNI AEGEIIAFIG 
PNGAGKSTTI KMLTGILYPS AGDALVEDIN PCKKRKQLAY KIGTVFGQKE QLWTHLTPYD
NFKFFGAVYD IAEEEVEARI DELKNTFELS EFINTPVRNL SLGQRIRCEI VASLIHKPKI
LFLDEPTIGL DPVVKENIRT LIKKMNKEFG MTVFLTSHDV GDIEKLCKRI IIVNHGKIVL
DDSMEKVKYH YLDKKMIEIK MKEETTLPRI EGVTVLKSKG VNLKLEVDTK VISIQEVLKW
LDTDNLMDIT ISNVPLEKII TQIYKERG