| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1116 |
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| Symbol | |
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| ID | 5741951 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 1407094 |
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| End bp | 1408464 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 641292221 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_001558233 |
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| Protein GI | 160879265 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAAGA GAACAAAAGA CACAAAGAAA AATCAAGACC ATGTCATGAA GATGCTTCTA
ATGGTTGCAA TACCAATTGC CATACAAAAT TTAATTAATG TTGGAGTAAG TACCGCAGAT
ACTTTGATGA TTGGAAATAT TAGTGAGGTA CAATTATCGG GAGTCTCACA GGCTAATTTA
GTTTATTTTA TTTTTACAAC AGTATTGTTT GGACTAGCTT CCGGTTCCGT AGTTTTGAAT
GCACAATACT TTGGTAAGAA GGAAATGGAG CCAATAAGAA CTATATTAGG ATTTATGATT
CGTGTCGGTG TTATTATGGG AGCTCTTATG GGACTGGTCG TACTTGCTTT CCCAAATCAA
GCAATGTCTA TTTTTACAAA TGAGCCTGAA GTTATCATGT ATGGTTCAAA ATATCTTCGA
ATTATTGGAT TTTCCTATCT ATTCTCTGGT TTTACTGGTG TATATCTAAT GGGGCTTCGT
AGTATTCAGA ATGTAAACGT TTCGATGTAT ATCTATGGAA TCTCACTATG CACCAATGTG
GTACTAAATT ATATCTTTAT CTATGGAAAA TTAGGTTTTC CGCGAATGGA GATAGAGGGA
GCTGCCATTG CTACTTTAAT TTGTAGAATT CTTGAGAGTA TTTTAGTTGT TATTTATATG
TATAAGGGTG AGAAGGTACT TAAGATGAGA CTTTCTTATA TTTTTAAGAG ATCTAAACAG
TATTTTCGCT CTTTGGCTCG TTATAGTGCG CCAGTGCTTA TGAGTGAGGT TAACTGGGGG
CTTGGGATTG CTGTTCAGTC TGCAATCATT GGGCGTATGG GTGTTAGTTT TCTTACAGCC
GCCAGCTTCA TTAATGTAGT ACAACAGTTA GCCGGAATCA TTCTGATTGG TATTGGTGTG
GGTTCGAGCA TTATAATAGG GAATTTGATT GGTGAGGGAA AAGAGCATGA GGCGAGAATG
CTAGCCAATA AGTTAATACG TATCAGTATG ATACTCGGAG GAATTGTTGC TTTTGCAGTA
ATCTTACTAC GTCCAATCGC TCCTAACTTT ATTGAGGCGT CTAAGGAAAC AGCGGATTTA
ATTCGTCAGA TGCTATTTGT TTCGGCTTAC CTCTTATTCT TCCAAGCCTT ATCTGTATTA
ACTATGGCCG GAATATTACG TGGTGCAGGG GATACCCTTT ACTGTGCAAC CTTTGATGTT
TTGACCTTAT GGGTACTAAA ACTTGGAGGA GGTTTGCTTG CAACCATAGT ACTTCATCTT
CCACCTGTAT GGGTTTACTT TATCTTAAGT AGCGATGAGT GTGTTAAAGC GCTATTTACG
GTACCGCGGG TCTTAAAGGG ACGTTGGATT CATGATACAA CACTGCATTA A
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| Protein sequence | MQKRTKDTKK NQDHVMKMLL MVAIPIAIQN LINVGVSTAD TLMIGNISEV QLSGVSQANL
VYFIFTTVLF GLASGSVVLN AQYFGKKEME PIRTILGFMI RVGVIMGALM GLVVLAFPNQ
AMSIFTNEPE VIMYGSKYLR IIGFSYLFSG FTGVYLMGLR SIQNVNVSMY IYGISLCTNV
VLNYIFIYGK LGFPRMEIEG AAIATLICRI LESILVVIYM YKGEKVLKMR LSYIFKRSKQ
YFRSLARYSA PVLMSEVNWG LGIAVQSAII GRMGVSFLTA ASFINVVQQL AGIILIGIGV
GSSIIIGNLI GEGKEHEARM LANKLIRISM ILGGIVAFAV ILLRPIAPNF IEASKETADL
IRQMLFVSAY LLFFQALSVL TMAGILRGAG DTLYCATFDV LTLWVLKLGG GLLATIVLHL
PPVWVYFILS SDECVKALFT VPRVLKGRWI HDTTLH
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