Gene Cphy_1097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_1097 
Symbol 
ID5741932 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp1386162 
End bp1386935 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content35% 
IMG OID641292202 
Producthypothetical protein 
Protein accessionYP_001558214 
Protein GI160879246 
COG category[R] General function prediction only 
COG ID[COG0390] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID[TIGR00245] conserved hypothetical protein TIGR00245 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.215237 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGAGA TTATATCATT AAATATTGGG CAATTCGCTT TAATATATTT GCTTCTTTTA 
ATAGTACTTT TGGTAATGAA AAAATGTAGA ATTAATCAAA CCAAGCTGCT TGTGATCGCC
AGCTTACGGA TGACCGTACA ACTTACTTTG GCTGGTTTGA TATTGACTTA TATTTTTAAG
AATCCTCATC CTGCATTTAC AATTTTTTAC ATTCTGTTGA TGACAGGATT TGCGATTTAT
ATGGTGCTTA ATAGAAACAA AGAAATTAAT AGAAAATTCA AGTTGATAGT GGCGGCTTCC
CTCGCTTTAT CGGGTATTGC TATTATATGC TTTTTTATAA TAGCAGTGGT CGGTGTAAAT
ATTTTTAATC CCCAATATAC GATTCCAATC GGTGGGATGA TAATAGGAAA CGCTATGACA
GGGGTAAGCC TCGGGCTTAA AACATTCAAT GAGACAATCA AATCGCAAAG AAATAGAATA
GATACGCTTA TAAATATGGG TGTTACGCCT CAAAAAATAT TAATACCATT TGTAAATCAA
GCGATTGAGA CGGCTCTCTT ACCGACCTTA AACTCAATGC TTAGCATGGG GGTTATCTCT
TTACCAGGTA TGATGACAGG TCAGATTCTA TCCGGTACCC TTCCTATGAC GGCAATACTT
TACCAAATAG CGATTATCAT AGCCGTAAGT GCAGTCACAT GCCTATCTGT TTTCTGCTCT
TTGTTTTTTG GTTATAAAAC GCTATATAAT AAACGAAATC AAATAACGAT ATAA
 
Protein sequence
MNEIISLNIG QFALIYLLLL IVLLVMKKCR INQTKLLVIA SLRMTVQLTL AGLILTYIFK 
NPHPAFTIFY ILLMTGFAIY MVLNRNKEIN RKFKLIVAAS LALSGIAIIC FFIIAVVGVN
IFNPQYTIPI GGMIIGNAMT GVSLGLKTFN ETIKSQRNRI DTLINMGVTP QKILIPFVNQ
AIETALLPTL NSMLSMGVIS LPGMMTGQIL SGTLPMTAIL YQIAIIIAVS AVTCLSVFCS
LFFGYKTLYN KRNQITI