Gene Cphy_1054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_1054 
Symbol 
ID5741890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp1326734 
End bp1327660 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content39% 
IMG OID641292161 
Producthypothetical protein 
Protein accessionYP_001558173 
Protein GI160879205 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000426139 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAAAC AATTAGTACA TAGTCCTTTA TTCCGGGACC CGATATATGA TGGTGCAGCA 
GATCCTGTGA TAATCTGGAA TCACATAGAA AAACAGTGGT GGATGATTTA TACAAATCGC
CGTGCGAACG TAAAAACTAC TGGTTTTGAA TGGATACATG GAACAGATTT AGGGGTCGCA
TCTTCAAATG ATGGTGGGCA TACTTTCGTT TATCGGGGGA TATTAGAAGG TCTCGCTATC
GAACCGGGAA GAAATACATT TTGGGCACCT GAGATTGTCT ATGAGAAGGA AGTTTATCAT
ATGTATGTAT CTTATGTCGT TGGTGTGCCA TCTACATGGA ACTTTGAACG ACATATCTTA
CATTATACCA GTAAGAATTT ATGGGACTGG GAGTATATCG GTAGATTACC ACTCTCCTCC
AATCGCTGTA TAGATGCCTG TGTACATAAG TTGCCAAATG GAAATTACGG ACTTTGGTAT
AAGGATGAAG TGAATGAGTC TCATACTTAT ATGGTGGAAA GTAGTGACTT GTATGAATTT
CATAATCCGA TAGCAGTCTT AGAGGAATTT GCACATGAAG GACCAAATGT ATTTCGTTTT
AAGGGTTTTT ACTGGATGAT TATTGATACT TGGAAGGGGC AAGGAGTGTA TCGAAGTAAA
GATGCTATGA CCTGGATTCG TTGTAATGAT ATCTTATCAG AAACTGGAAA TAAGGAGGAT
GACTACGGGT TTGGTTATCA TGCAGATGTG CATGTACAAG AAGATGAGGC ATATATCTTC
TATTTTACGC ATCCGGGAAG GATACCATGT GTAGAAGAGA ATTTCTACGA ACAACAGAGA
TCTTCTCTTC AAATTAGAAG GCTTACGGTA AATAATGGGG AATTGTCTTG TGACCGTGAG
GAAGAGTTTA TGTATGAATT AATTTAA
 
Protein sequence
MSKQLVHSPL FRDPIYDGAA DPVIIWNHIE KQWWMIYTNR RANVKTTGFE WIHGTDLGVA 
SSNDGGHTFV YRGILEGLAI EPGRNTFWAP EIVYEKEVYH MYVSYVVGVP STWNFERHIL
HYTSKNLWDW EYIGRLPLSS NRCIDACVHK LPNGNYGLWY KDEVNESHTY MVESSDLYEF
HNPIAVLEEF AHEGPNVFRF KGFYWMIIDT WKGQGVYRSK DAMTWIRCND ILSETGNKED
DYGFGYHADV HVQEDEAYIF YFTHPGRIPC VEENFYEQQR SSLQIRRLTV NNGELSCDRE
EEFMYELI