Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_1002 |
Symbol | |
ID | 5743942 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | + |
Start bp | 1266349 |
End bp | 1266879 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 641292109 |
Product | 2'-5' RNA ligase |
Protein accession | YP_001558121 |
Protein GI | 160879153 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1514] 2'-5' RNA ligase |
TIGRFAM ID | [TIGR02258] 2'-5' RNA ligase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000000523375 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGGATTT TTATTGCAAT AAATTTTACG GAAGAGATAA AGCATAACTT ATATGAGCAA ATTTTGAATT TAAAAGGGAA GTCAATAAAG GGAAATTTTA CACGCAAAGA AAATCTTCAC CTAACTCTGG CTTTTCTAGG GGAGGTTGAT GAAAAGCATT TAGAAACATT GAAAAATGTA ATTAATCAAT TAGAGGTCTC TGAATTTCCT ATTAATCTTT CTAATATGAG TGCATTCCAT AATGGAGATG AGCTGTTGCC TTGGATAGGC ATAGTTCCTA ATACAAAACT GCAAGTATTG CAGCAGCAAT TAACTGAAGG ATTAAAGGCA TCTGGATTTG CCCACGATGA AAAGAAATTC ACTCCTCATG TCACCTTAGG GCGTAAAGTT CTTATGAAAA GTAATACCGA GCTTAATAGG TATGACGGAT TATGTGGAAA AGAAATAGTG GTTAATGCAA TTAGTATAAT GAAATCTGAA AGGATAAATG GAATCCTAAC TTATACCGAA ATTTATAAAA GAAAGATTTA G
|
Protein sequence | MRIFIAINFT EEIKHNLYEQ ILNLKGKSIK GNFTRKENLH LTLAFLGEVD EKHLETLKNV INQLEVSEFP INLSNMSAFH NGDELLPWIG IVPNTKLQVL QQQLTEGLKA SGFAHDEKKF TPHVTLGRKV LMKSNTELNR YDGLCGKEIV VNAISIMKSE RINGILTYTE IYKRKI
|
| |