Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_0991 |
Symbol | |
ID | 5743931 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | + |
Start bp | 1256464 |
End bp | 1257372 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 641292098 |
Product | helix-turn-helix type 11 domain-containing protein |
Protein accession | YP_001558110 |
Protein GI | 160879142 |
COG category | [K] Transcription |
COG ID | [COG2378] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGATAG ATCGATTAAT TGGTATCATT ACTGTCCTAC AAAATAATAA AAAAGTAACT GCACCTTATC TTGCCAAAAA GTTCGAAGTA TCAAGGCGTA CCATTAATCG AGATATAGAA GATATCTGTA AGGCAGGTAT ACCAATCGTT ACAACACAGG GTAATGATGG TGGTATCTCT ATTATGGAAG GATTTAAGTT GGATACTACG ATTTTTACTA CGGAGGAACT AGAAGCTATT CTAGTTGGAT TAAAATCATT TGATAGTGTC TCCGCTCACT CTGCATCACA TAAGCTAATA CATAAAATTT CACCAAATAG ACCTACTTTA ATGTCTCTTG CGGACAGTAT ATCCATTGAT TTATCTTCTC ATTATAAAGA TAGTTTAGCT CCTAAGATTG CACAATTAAG GGAAGCAATA CAGCAAAAAA GAGTTGTTAT GTTTCACTAT TATTACAAGA AAGGAGAGGA TGATAAGAAG ATTGAACCTT ATCAAATCGT TTTTCAATGG TCTTCATGGT ATGTATTTGG ATTTTGCTTA AAGAAGCGAG AATTTCGGTT ATATAAATTA AATCGCTTAT GGGATTTACA GACGACTGAG GAAGAATTTA TCCAAAGAGA AGTACCGGAA GAGTTTTTGG ATTTCAATCG ACACATTCCG GATAATTATG AAATTACTGT AGTATTTGAT TCGAGTGAAA AATATCGCTT AATTGAAGAA TATTGTTTTG GTTGCTTTAG AGAAATGGAA GATGGGAAAT TATTGTTTAA GCGAGGGTTT ACAAATATAG ATGTAGCAAT AGATTGGTTT TTAGGCTTCG GAGACCGTGC CGAAATATTG GAGCCAATCG AAATGAGAAC ATTAATCAAA GAAAAAATTC AAAAAATGTC GGAGCGGTAT CAATTTTAA
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Protein sequence | MKIDRLIGII TVLQNNKKVT APYLAKKFEV SRRTINRDIE DICKAGIPIV TTQGNDGGIS IMEGFKLDTT IFTTEELEAI LVGLKSFDSV SAHSASHKLI HKISPNRPTL MSLADSISID LSSHYKDSLA PKIAQLREAI QQKRVVMFHY YYKKGEDDKK IEPYQIVFQW SSWYVFGFCL KKREFRLYKL NRLWDLQTTE EEFIQREVPE EFLDFNRHIP DNYEITVVFD SSEKYRLIEE YCFGCFREME DGKLLFKRGF TNIDVAIDWF LGFGDRAEIL EPIEMRTLIK EKIQKMSERY QF
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