Gene Cphy_0900 details

Gene Information

• Locus tag: Cphy_0900
• ID: 5741772
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium phytofermentans ISDg
• Kingdom: Bacteria
• Replicon accession: NC_010001
• Strand: -
• Start bp: 1150709
• End bp: 1152709
• Gene Length: 2001 bp
• Protein Length: 666 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 641292012
• Product: ABC transporter related
• Protein accession: YP_001558024
• Protein GI: 160879056
• COG category: [R] General function prediction only
• COG ID: [COG0488] ATPase components of ABC transporters with duplicated ATPase domains

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATACTAG CATGTAAGAA TATTAGTAAA AGCTTTGGAA CGACTCCAAT ACTCGATAAA 
GTCGCTTTCC ATGTAAATGA GCGTGAGAAA GTAGCTATCG TAGGAATTAA TGGTGCAGGA 
AAGTCTACCT TAATAAAAAT CATCATGGGT GAATTAACTG CCGATGAAGG AGAGATTATC 
TTTGCTAAAG GTGCAACTGT AGGATATCTT GCTCAACATC AGGACTTATC CACAGATAGT 
ACCATTTATG AAGAAGTTTT AGCAATAAAA TCAGATATAA TTAAAATGGA AGAAACAATT 
CGCCGTCTTG AAATAGATAT GAAATCAGCT ACTGGCGCAG AATTAGAACG AATGCTTTCT 
TCCTACTCAA GACTAACACA TGATTTTGAG TTAAAGAATG GATATGCCTA CCAAAGTGAA 
GTAATTGGTG TACTAAAAGG TCTTGGCTTT ACGGAGGAAG ATTTTAACAA AAAAGTATCA 
ACCCTTTCTG GTGGACAAAA AACACGTGTA GCTCTTGGTA AGCTTCTCTT AAGTACACCA 
GATATCATCT TCTTAGATGA GCCTACCAAC CACCTTGATA TGGAATCTAT CGCTTGGTTA 
GAAACTTTCT TAGTGAATTA TTCTGGAGCT GTTGTTGTAA TCGCCCATGA CCGTTACTTC 
CTTAATAAAG TAGTTTCCAA GGTTGTGGAA TTAGATAACA CAAAGGCGAC AATGTTCGAA 
GGAAATTATT CTGACTATGC AATGAAAAAA GAACAACTTC GTGAAACCAT GATTCGTCAT 
TACTTAAATC AGCAGCGTGA AATTAAACAT CAAGAAGAGG TCATAGCAAA ACTTCGTTCC 
TTCAACCGCG AAAAATCCAT AAAACGTGCG GAAAGTCGTG AGAAGATGTT GGATAAAATA 
GATCGCCTTG ATAAACCAGT TACTGTAAAT GATAAGATGC ATATAGCCCT TGAACCAAAT 
ATCATAAGTG GTAATGATGT ACTAACAGTG ACTGATTTGC GTAAATCCTA TGGTTCTCTA 
ACACTGTTTG ACCAACTAAA TTTTGAGGTA AAACGTGGTG AAAAAGTTGC GATTATCGGT 
AATAACGGTA CTGGTAAAAC AACCATCTTA AAAATAATTA ATCAGATTAT CAATGCCGAT 
GCTGGAGATG TAAAACTTGG TGCAAAGGTT TTTGTTGGTT ACTATGATCA GGAACATCAT 
GTTCTTAATA TGGACAAAAC AATCTTTGAC GAGATTCAAG ATACGTATCC TAATATGGAT 
AACACAAGAG TACGTAATAT CCTTGCTGCA TTTTTATTCA CTGGCGATGA TGTATTTAAA 
TTAATTAAAG ATATCAGTGG TGGAGAGCGT GGCCGCGTAT CTCTAGCAAA GCTTATGCTA 
TCCGATGCAA ACTTCCTAAT CATGGATGAG CCAACCAACC ATCTTGACAT TACATCAAAG 
GAAATACTTG AGAATGCGAT TAACAATTAT ACCGGTACGG TGCTCTATGT ATCCCATGAC 
CGTTATTTTA TTAATCGTAC TGCTTCCAGA ATTCTTGACT TAACCAATCA GACTTTCTTA 
AATTATATTG GTAATTATGA TTATTATCTT GAGAAGAAAC CAGAGATGGA ATGGAGAGCC 
TTTGGCAACA ATAATGGCTA TAATCAGTCT GACGCTAACG ATAATATTTT AAATGGACTT 
CGAATCAATA AGCATCTAGA TCAGGCAAAT AAAGAATTAC AAACTTCATC TTTTCCACAA 
GAACCAGTTT CTGAGAATAA GCTAGACTGG CAACAGCAAA AAGAAGAGCA AGCCAAACTT 
AGAAAGCGTC AGAATGAATT AAAGAAAGTT GAAGATGAAA TTACACGTTT GGAAGCAAGA 
AATGAGGAAC TGGAAGTATT GCTTGCAGAC TCTTCTATCT ATACAAACTC ATCAAAACTA 
ATCGAAGTTC ATAAAGAAAA GAAGGAATTG GAAGAAAGAT TAGAAGTTCT TATGGAGCAA 
TGGGAAGAAC TTAGTGAGTA A 

 

Protein sequence

MILACKNISK SFGTTPILDK VAFHVNEREK VAIVGINGAG KSTLIKIIMG ELTADEGEII 
FAKGATVGYL AQHQDLSTDS TIYEEVLAIK SDIIKMEETI RRLEIDMKSA TGAELERMLS 
SYSRLTHDFE LKNGYAYQSE VIGVLKGLGF TEEDFNKKVS TLSGGQKTRV ALGKLLLSTP 
DIIFLDEPTN HLDMESIAWL ETFLVNYSGA VVVIAHDRYF LNKVVSKVVE LDNTKATMFE 
GNYSDYAMKK EQLRETMIRH YLNQQREIKH QEEVIAKLRS FNREKSIKRA ESREKMLDKI 
DRLDKPVTVN DKMHIALEPN IISGNDVLTV TDLRKSYGSL TLFDQLNFEV KRGEKVAIIG 
NNGTGKTTIL KIINQIINAD AGDVKLGAKV FVGYYDQEHH VLNMDKTIFD EIQDTYPNMD 
NTRVRNILAA FLFTGDDVFK LIKDISGGER GRVSLAKLML SDANFLIMDE PTNHLDITSK 
EILENAINNY TGTVLYVSHD RYFINRTASR ILDLTNQTFL NYIGNYDYYL EKKPEMEWRA 
FGNNNGYNQS DANDNILNGL RINKHLDQAN KELQTSSFPQ EPVSENKLDW QQQKEEQAKL 
RKRQNELKKV EDEITRLEAR NEELEVLLAD SSIYTNSSKL IEVHKEKKEL EERLEVLMEQ 
WEELSE