Gene Cphy_0892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_0892 
Symbol 
ID5741764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp1142074 
End bp1143030 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content36% 
IMG OID641292004 
ProductD-isomer specific 2-hydroxyacid dehydrogenase NAD-binding 
Protein accessionYP_001558016 
Protein GI160879048 
COG category[H] Coenzyme transport and metabolism
[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG1052] Lactate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTG TAATCATGGA AGCAAACACT TTGGGAAACG ATGTTGATTT AGGCATGTTT 
CAAGAGTTTG GTGATGTCGT TATCTATGGA GAATCCAATC CGTTAGAAAA TGCAGAAAGA
ATAAAAGACG CTGATGTTAT CATAGTAAAT AAAATTCCAA TGAACGAGGA TATTCTGAAA
GGTGCAACAA AGTTAAAATT AATTTGCTTA ACTGCGACGG GAACAAATAA TATAGATTTT
ACGTATACCG AAAAACGTGG AATTTCGGTA GCCAATGTAA AGGGCTACTC AACCCAGTCT
GTAGTACAGC ATACGTTTGC CTTATTATTT TACGTATATG AAAAATTAGC TTACTATGAT
CAATATGTAA AGTCTGGGGA TTATACAAGA AGCGATATCT TTAGTAATTT CGATGTGAAA
TTTCATGAAT TGTATGGAAA AACTTTCGGT ATCATAGGGC TTGGAGAAAT CGGACAGGGA
GTAGCTAAAA TTGCAGAGTT ATTTGGTTGC AAAGTGGTTT ATTACTCCAC TTCTGGTAAA
AATCTAAATT CTGATTACGA AAGAGTGGAT TTACAAACCT TGTTAAAAAT CTCAGATGTA
GTTTCTATTC ATGCTCCGTT GACTAAAGCG ACGACGAATT TAATCGGAGA AGCTGAATTA
GAGATGATGA AGCCAGATGC TATTTTATTA AATCTAGGAC GTGGAGCAAT CGTAAATCAA
GAAGCATTAG CAAATGCTTT GTTAGCAGGA AAAATTGGTG GCGCAGGGCT CGATGTTTTA
ACAGTGGAAC CAATGCTCGC TGATAATCCG TTGCTAAAAG TAAAAGATAG CACCCGATTA
ATCATAACAC CACACATAGC CTGGGCTACT GTAGAAGCAA GAAATCGCTG CGCGAAAGAG
GTATATTTTA ATATAAAGTC ATATCTATCG GGTGAACCAA GAAATATTGT AGAGTAG
 
Protein sequence
MKIVIMEANT LGNDVDLGMF QEFGDVVIYG ESNPLENAER IKDADVIIVN KIPMNEDILK 
GATKLKLICL TATGTNNIDF TYTEKRGISV ANVKGYSTQS VVQHTFALLF YVYEKLAYYD
QYVKSGDYTR SDIFSNFDVK FHELYGKTFG IIGLGEIGQG VAKIAELFGC KVVYYSTSGK
NLNSDYERVD LQTLLKISDV VSIHAPLTKA TTNLIGEAEL EMMKPDAILL NLGRGAIVNQ
EALANALLAG KIGGAGLDVL TVEPMLADNP LLKVKDSTRL IITPHIAWAT VEARNRCAKE
VYFNIKSYLS GEPRNIVE