Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_0864 |
Symbol | |
ID | 5741736 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | + |
Start bp | 1105480 |
End bp | 1106991 |
Gene Length | 1512 bp |
Protein Length | 503 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 641291977 |
Product | two component AraC family transcriptional regulator |
Protein accession | YP_001557989 |
Protein GI | 160879021 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4753] Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAGC TTTTGATTGT AGAGGATGAA AAAATGATCA GGCAGGGCAT AAAAAGTATC GCAATGCGTG CACCTGTTCC AATCGAAGAA ATTTTAGAAT GTAAAAATGG GGAAGAAGCA TATGAAGTAG TAAAAAATGA GGTAATCGAT GTCATGATTA CTGATATTCG CATGCCCGGA AAAGATGGAA TAACTTTAGT AAAAGAAATT CAAGTTTTAC CTCATATACC TAAAATAGTC GTAATTAGCG GGTATGATGA TTTTAATTAT GCAGTTGAAT TACTGCGTTG CGGAGCTAAG GATTATTTAT TAAAACCAAT TGAGCGTGAA AAAATATTCG ATGTGTTAAT AAAATTAGAA AAGGAACTGT GTGAAGAGAA GGAAGAAGCA GAAAAAAGGA ATCTTGTATG GCAGCAGCAG TTACGTTATT GCATGTTAGG AGAAGCAAGT TTAGATAGTT GTAAGGTAAC CTTTGAAGAA TTCTTACAAA ATGAAAAATA TCTTTTATGC TGTACGAATA TATGGAGAGA AGATTGGCTA GAGGAAACGA ATATTTTAGG ATTAACGAAG ATGCAACATC AGAATATCTA TATAATGAGG GTCTCGCAAA AGCAGCTTGT ACAAAAAGTT TTTTGTGAAG ATTATGTCGG ATTTAGCGAA GAACATGCAC AATTTGAAGA ATTAAAGATT GCTTTCAAAG AAGCATTATG TGCAAGAAAG CAATCCTTTT ATCAGGAGAG TCACCAGATT GACTATAAAG ATTGTAGTAA TAATCTAATT AAGATTAAGG AGAAGGAAAA GCAGAGAGAA GAAAATGAAA CTAATTCTTC TAGAGATTCA GTTATTGAAC TGACACAAAA TGAGATTGAC CAATATGTTC AATTGTTTGG AACAAGCAAG TGGGAACAAA ATGATAAATT CATCAAGAAT CTTTACTACA ATGTGAAATG TGGAAAGATT GCACCGGAAG ACTTTGAGCA TACGATGCAA TGTTTTGTCA AAGGAATTGA GGATAATTAC CAAAGCGTTA TAGATTTTAG CGATACCAGA GTTCTACATC ATAAAAGTAT CTATGAATAT GATTCAGGCT CAAAATATTT AGAAAATTTA ATGGAGTGGC TGGTTGAACT TCATGAAAGA ATTCTATCTG AATTTTCTGA TTTTAAGAAT AAGCAGAAGA TTCAAACAGC TTTGATTTAT ATTAAGGAAA ATTATAATAA AGATTTAAAT ATGGCAGTGG TATCTAATTA CATATCAATG AATTATTCTT TATTTTCTTT TACTTTTAAA CAATATACAG GAACTTATTT TGTCCAATAT TTAAAGGATC TTCGGATTGC AAAAGCGAAA GAATTGCTAG AGAAGACTGA GAAAAAAATA GTGGAAATCA GTAATGAAGT CGGATATGAA AATGAAAAAC ATTTCATGAA GATATTCAAG AATCACTGTG GAGTGTCCCC ATCGGAATTT CGAAAAAACT CTTATGTGGG GAAAGCAAAA CCGGTGCATT AA
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Protein sequence | MKKLLIVEDE KMIRQGIKSI AMRAPVPIEE ILECKNGEEA YEVVKNEVID VMITDIRMPG KDGITLVKEI QVLPHIPKIV VISGYDDFNY AVELLRCGAK DYLLKPIERE KIFDVLIKLE KELCEEKEEA EKRNLVWQQQ LRYCMLGEAS LDSCKVTFEE FLQNEKYLLC CTNIWREDWL EETNILGLTK MQHQNIYIMR VSQKQLVQKV FCEDYVGFSE EHAQFEELKI AFKEALCARK QSFYQESHQI DYKDCSNNLI KIKEKEKQRE ENETNSSRDS VIELTQNEID QYVQLFGTSK WEQNDKFIKN LYYNVKCGKI APEDFEHTMQ CFVKGIEDNY QSVIDFSDTR VLHHKSIYEY DSGSKYLENL MEWLVELHER ILSEFSDFKN KQKIQTALIY IKENYNKDLN MAVVSNYISM NYSLFSFTFK QYTGTYFVQY LKDLRIAKAK ELLEKTEKKI VEISNEVGYE NEKHFMKIFK NHCGVSPSEF RKNSYVGKAK PVH
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