Gene Cphy_0814 details

Gene Information

• Locus tag: Cphy_0814
• ID: 5745294
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium phytofermentans ISDg
• Kingdom: Bacteria
• Replicon accession: NC_010001
• Strand: +
• Start bp: 1041784
• End bp: 1043595
• Gene Length: 1812 bp
• Protein Length: 603 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 641291928
• Product: binding-protein-dependent transport systems inner membrane component
• Protein accession: YP_001557940
• Protein GI: 160878972
• COG category: [E] Amino acid transport and metabolism; [P] Inorganic ion transport and metabolism
• COG ID: [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.959889
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAGAATA AAAATGAAAA TAACAAGCAG AATCAAAGCA ATGCTTCTCT TGTTCAAAAT 
AATCAGCCTG CCCAAAATGA GAAAACTATG AATCAATCGG TAGAGAGAAA GATGGCACTC 
GATGATGATC AAAGAGTAAA AGTTCTATCT CCTTCCATGT TAGTATTTAA AAGATTTATT 
CGTAATAAAC TTGCAATTAT TGGTTCATTT ATCATTGTTG GTATGTTTTT ATTTGCATTC 
GTAGGCGGAA TTGTAAGCCC ATATAACGAA AGTCAGGTAT TTATGGGATA CGAAGCTATG 
TCAAAAGACT ACGCTAGTGT TACTAGAAAT AAAGAATTTC GTTATACAAC AGTAGATGGG 
AAAAACTTTC CATCCGCTGT GAAGGCAGAA GTAATCCTTG CAGTAAATTC AGGTAAAAGT 
GAATTTACTT CTATGGGAAA CGTATATGCA TTAACAAAAG AAGGGGAGAA TCTTTACAGA 
ATTTCTCTTA TGGATAAGTA TGCAACTGCC ACAATTATCC GTGGTACTGC AGATATTAGT 
GTTGTAGATG GAAAAACATT ATCAGAAGCA GTTAAGAATG GTTTTTTAGC AGCAATTGAA 
GCAAAAGAAA CTAGTTTTAC TGTGGATGGT GTTACCTATC AGATTTCCAA TCAAGGAAAA 
GAGTACTCCT TAGGCGTACT TGATGATGTT GCATTAGCGT CTCATAAGAT TTTAGATGCT 
TATAACGCAG CTACAAAATT AAGCTTAGAA TTTAAACTTC AAGCGGAAAA AGCTTTTATT 
GAGGGAAAAA ATAGCTTTGA AGTGGAAGGC GTAACTTATT ATATTGATTC AGAAGGAAGT 
TCTGCAACAA TATATTATAA TGAAAATGGT AATCAAGTAA ACTATGCTCA GCTTTCTGAT 
TTTGTTGTAG CTCCAATAGG AAGTGACGTT TTCCTTGACG TTGAATTTAA GTCATTAGTT 
CAACAAGCAA TCAACGATGG TGAAACATCA GTTACTCAGA CAGATGCAGA AGGCAATGAA 
GTAGTATATA AAATCGAGCG TAAAAACGAA CAGTATACAG TGAAAGCAGA CACTGAAACT 
CAGTTAATTC AGATTTATCA AAGTCCAAGT AAGTCACACT GGTTGGGTAC CGATGGAAAT 
GGTATGGATA TCATGACTCG TTTAATGTAT GGTGGTCGTA TCTCCTTAAT GATTGGATTT 
ATTGTAGTTA TAATTCAGAC ATTCCTTGGA GTAGTCTTAG GTGGTATAGC AGGTTACTTT 
GGTAAGTGGG TGGATAACCT AATCATGCGT ATCGTAGATA TCTTTTATTG TATTCCATCA 
CTACCACTAA TTATTATTCT AGGCTCTATC ATGGATTCAT TAAAAGTAAA TCCACAGGTT 
CGTATTTATT TCTTAATGAT TATTATGGGA TTACTCGGAT GGCCTGGTGT AGCACGTATG 
GTACGTGGTC AGATTCTTTC TCTTCGTGAA CAAGAATTTA TGACAGCTAC CGAAGCGATG 
GGTATTTCGA TTCCAAGAAG AATTTTCCGT CACTTAATAC CTAATGTAAT TCCACAGTTA 
ATCGTTATGG CAACGATGGG TCTTGGTGGC ATTATCTTAA CAGAATCTTC TTTAAGTTTC 
TTAGGTATTG GAGTTAAGTT CCCATTTGCT TCTTGGGGTA ACATTATTAG TGCAGTATCC 
AATGTTCATG TTATGACAAA TTACTGGTTT GTTTGGATTC CAGCTGGTTT CTGTATTCTC 
TTAACCGTAT TGGCATTTAA CTTTATTGGT GATGGTTTAC GTGATGCGTT TGATCCTAAG 
ATGAAAAGGT AG 

 

Protein sequence

MENKNENNKQ NQSNASLVQN NQPAQNEKTM NQSVERKMAL DDDQRVKVLS PSMLVFKRFI 
RNKLAIIGSF IIVGMFLFAF VGGIVSPYNE SQVFMGYEAM SKDYASVTRN KEFRYTTVDG 
KNFPSAVKAE VILAVNSGKS EFTSMGNVYA LTKEGENLYR ISLMDKYATA TIIRGTADIS 
VVDGKTLSEA VKNGFLAAIE AKETSFTVDG VTYQISNQGK EYSLGVLDDV ALASHKILDA 
YNAATKLSLE FKLQAEKAFI EGKNSFEVEG VTYYIDSEGS SATIYYNENG NQVNYAQLSD 
FVVAPIGSDV FLDVEFKSLV QQAINDGETS VTQTDAEGNE VVYKIERKNE QYTVKADTET 
QLIQIYQSPS KSHWLGTDGN GMDIMTRLMY GGRISLMIGF IVVIIQTFLG VVLGGIAGYF 
GKWVDNLIMR IVDIFYCIPS LPLIIILGSI MDSLKVNPQV RIYFLMIIMG LLGWPGVARM 
VRGQILSLRE QEFMTATEAM GISIPRRIFR HLIPNVIPQL IVMATMGLGG IILTESSLSF 
LGIGVKFPFA SWGNIISAVS NVHVMTNYWF VWIPAGFCIL LTVLAFNFIG DGLRDAFDPK 
MKR