Gene Cphy_0806 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_0806 
Symbol 
ID5745286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp1032036 
End bp1033040 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content37% 
IMG OID641291920 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001557932 
Protein GI160878964 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGGGTA AAAACATGTT AAAATATTTT TTAAAAAGAC TTGCAATTTC TATAATCATT 
CTATTTGGGG TATCAATTAT TATTTACTTT ATCGTTCGAA TGATGCCAGC TGATTATATT
GACCAGCATA CCGCTGCGCA GGTTGCTCAA GGTCAGCTAA CATTAGAAGA TGTACAAAGA
ATGAAGGAGT TGTATGGTAT AGGAGACAAT TCCATAGGTG GTATAATAAA AAGTTACGGA
CAGTGGATAA CCAAGGCACT TCGTGGTGAT TTTGGTGTGT CCTTTGTTTA TGGACGTCCG
GTTCATCAAG TGATCGCAAA ATATATGTGG ATTTCATTTG GTATATCGCT AGCAGCGATG
ATATTAAATA TATTAATTTC GATACCGCTT GGTATCGTAG CGGCAACGAA GCAATATGGT
GCAGCTGACT ATATAGTTAC AGTATTGGCA ATGATAGGTA TTTCACTGCC ATCCTTTTTC
TTAGGTGCAT TATTGTTACG TGTATTCTCT ATAGGTCTTG GATGGTTTCC ATTACAGGGA
CTGTCTGATG CGACACAAAT AATAACAGGT TTTAAACAAG TTCTTGATAA ACTTCATCAT
TTAGTACTTC CAATGACGAC CCTTGTTATC TTGAACATTG GTGGTTTGAT GCGTTATACA
AGAACCAACA TGTTAGAAGT ATTGAATTCT GATTATATCC GTACTGCAAG GGCAAAAGGA
TTGTCTGAGA AGTCGGTTAT TTATAAACAT GCATTTCGTA ACACTTTAAT ACCTATTGTA
ACCATGCTAG GTGGAAGTCT TCCAGGTTTA TTTGGTGGTG CATTGTTAAC AGAAACGGTA
TTTGCAATTC CTGGTATTGG CTCTACTTCT TATAAGGCAA TGTTACAAGG TGATATTCCA
TTTGTTATGG GATATATGAT GTTTATAGCT GTATTAACTG TACTAGGTAC CATTTTTGCG
GATATATCGT ATGCAATTGT GGACCCTCGT GTGAAACTGC AATAA
 
Protein sequence
MWGKNMLKYF LKRLAISIII LFGVSIIIYF IVRMMPADYI DQHTAAQVAQ GQLTLEDVQR 
MKELYGIGDN SIGGIIKSYG QWITKALRGD FGVSFVYGRP VHQVIAKYMW ISFGISLAAM
ILNILISIPL GIVAATKQYG AADYIVTVLA MIGISLPSFF LGALLLRVFS IGLGWFPLQG
LSDATQIITG FKQVLDKLHH LVLPMTTLVI LNIGGLMRYT RTNMLEVLNS DYIRTARAKG
LSEKSVIYKH AFRNTLIPIV TMLGGSLPGL FGGALLTETV FAIPGIGSTS YKAMLQGDIP
FVMGYMMFIA VLTVLGTIFA DISYAIVDPR VKLQ