Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_0754 |
Symbol | |
ID | 5743870 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | + |
Start bp | 973056 |
End bp | 973583 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 641291866 |
Product | cytidine deaminase |
Protein accession | YP_001557880 |
Protein GI | 160878912 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0295] Cytidine deaminase |
TIGRFAM ID | [TIGR01354] cytidine deaminase, homotetrameric |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGGACG AGGATAATAA TATGGAATTT ACATTTCCAG CTTGTAGGCA AGCTGGAGAG TTAGTGCCAA TAAAGGCAGA CCAATTACCT TCCGATGAAA TTATGAACGA TTCAGTATGC AAGAATCTCA TTAGAGAGGC AATTGGTATG TTGAAACGTT CTTATGCACC GTATTCTAGT TTCCATGTTG GAGCTGCATT ACTGACAAAA ACGAATAAAA TCTACACTGG TTGTAATATT GAAAATGCAA CTTTTACACC AACGAATTGT GCAGAAAGAA CAGCATTTTT TAAAGCAGTC AGTGAAGGAG AAAAAGATTT TGTAGCCATT GCTGTCGTTG GAGGAAGAAA AGGAAATATT ATTGATTATT GTCCACCTTG CGGAGTATGT AGGCAAGTTA TGATGGAATT TTGTGATCCA AAAAAATTCA TTATAATTTT AGCAAAATCT GAAGAGGATT ATTGTGCATA CACACTTGCT GATATTCTTC CATTGGGATT TTCAGCAAAA AATATAGAGG ACGAATAG
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Protein sequence | MKDEDNNMEF TFPACRQAGE LVPIKADQLP SDEIMNDSVC KNLIREAIGM LKRSYAPYSS FHVGAALLTK TNKIYTGCNI ENATFTPTNC AERTAFFKAV SEGEKDFVAI AVVGGRKGNI IDYCPPCGVC RQVMMEFCDP KKFIIILAKS EEDYCAYTLA DILPLGFSAK NIEDE
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