| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0742 |
|---|
| Symbol | |
|---|
| ID | 5743858 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | - |
|---|
| Start bp | 956207 |
|---|
| End bp | 956944 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 641291854 |
|---|
| Product | two component transcriptional regulator |
|---|
| Protein accession | YP_001557868 |
|---|
| Protein GI | 160878900 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAATA CTACCATCTT GATTATCGAA GATGAACAAA ATATTTGTAA CTTTATAGCA
ACGAATTTAA ATGCTTATGA TTATAGGGTA CTAAAAAGCT TTACTGGTGC AGAGGGTCTA
TCTATCATCA CATCCCACTG TCCAGATTTA ATCCTACTGG ATTTAGGCTT ACCAGATATC
GACGGAATGG AGATTATATC GAAGATTCGC TCTTGGTCAA CTATTCCAAT TATTGTTATT
TCAGCACGGA CTCAAGAAAA GGAAAAAGTT CAAGCTCTTG ATTTAGGTGC GGATGATTAT
ATTACGAAGC CTTTTGGTAC CTCAGAATTA CTAGCACGTA TCCGTACCGC TCTACGTCAT
AATGCAAGTT TGGAATCTGG TAAGAATTTT CCGCCATCTA TCTTTCGCGC CAAAGATTTC
GTAATTGACT TTAATAAGCA CATTGTAATG GTCGGAGGAA AAGATGTACA TTTAACACAG
ATAGAATTTA AACTTGTTTC TTTGCTTGCT AACAATTCTG GAAGAGTTAT GACCTATGAT
TCCATTATTA CAAAGATATG GGGACCCTAT GCAGATCGAA ATAACCAGAT TCTTAGAGTA
AATATGGCTA ACATCCGTAG AAAAATTGAG GCAAATCCTG CAGATCCACA ATATATCTTT
ACTGAGGTAG GAATCGGATA TCGTATGATT GATGAAGAGC CGATGCAAAC TACTGAAGAC
GAAACTATAG ATAGTTAA
|
|---|
| Protein sequence | MKNTTILIIE DEQNICNFIA TNLNAYDYRV LKSFTGAEGL SIITSHCPDL ILLDLGLPDI
DGMEIISKIR SWSTIPIIVI SARTQEKEKV QALDLGADDY ITKPFGTSEL LARIRTALRH
NASLESGKNF PPSIFRAKDF VIDFNKHIVM VGGKDVHLTQ IEFKLVSLLA NNSGRVMTYD
SIITKIWGPY ADRNNQILRV NMANIRRKIE ANPADPQYIF TEVGIGYRMI DEEPMQTTED
ETIDS
|
|---|
| |