| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0694 |
|---|
| Symbol | |
|---|
| ID | 5743810 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | - |
|---|
| Start bp | 896904 |
|---|
| End bp | 900245 |
|---|
| Gene Length | 3342 bp |
|---|
| Protein Length | 1113 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 641291806 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001557820 |
|---|
| Protein GI | 160878852 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3459] Cellobiose phosphorylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.514428 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATACTAA AAACATTGTC TGCTCCAATC ATCCTAGAAA ACAGTAACAG TACTTTTACT
TTCTTACCAG GAGGAGACAA CTTTGAATGG ATTCATGAAT CCATTATGAT CAATGCTTTT
CAAGGTAATA CGCTTGATGG CTCTACCAAC AATTTGTATC TTCGAATATA CAAAGATAAT
TCCCTTGCTT TCTATCCTCT CATCGGGATG AACTCCAAAA GCACTATAAA ATCCGGTACA
TCAACACTTA TTTTTGAAGG AACGGCTGAG GATATTTCCT ATACCGTTAC TTTTCGTTTA
ACCCCATACG GTATTTGGTT CTGGGACATA TCTCTGTCTG GAAATTGCAA CAAAGCAGAT
ATTATCTATT CCCAGGATAT CGGTGTCGGT ACAAAGGGAA GTGTTAATTC CAATGAATTG
TATTTGGCAC AATATTTAGG TCATAGCATC TTTCAAGGAG ATTATGGCTA CGTGATATGT
TCCAGACAAA ATATGGCTCA GGGTGATTTA TTTCCATACC TCCAACAAGG TAGCTTAGGT
ATTCGTTCCA TTGCTTATTC TACCGATGGT ACACAATTTT TTGGTCTATC TTATAAAAAA
ACAAATATCC CTGAAGCATT GTACGGGGAT CTTCCAAGCA AAAATAAGCA GTATGAGTTA
GCTCATACCG CCCTTCAAAC CGAAGCCTTT TCGCTCTCTG GAACAAAACA ATTCTCTTTT
TATGGTATTT GTAAAACTAA TCATCCGGAA GTAATCCGTG AAATAGAGTA CATACAGGAA
TTAGAAAAAG CCTATGCCTA CCATGAATCT GGAGAGATCT TGCCTGTTAA TGTTCCTACC
CTTCAAAACA TAGGGGCTCC TTATGCTTCT TCTCGTTGGG ATGCCAAACA GGTAGAACAT
TATTTCCCAA AGAGACTTCT TGAGGAAAAA GAGGAGGAAG CATTACTCTC CTTTTTCACA
CCAGAAAAAA GTCATGTTGT ATTACAAGAC AAAGAACTAA CAACAGAACG TCCACACGGA
CATATTCTTA TGACAAATTT TGATGTAACT AAGGTTCCTC AAGGTGTAGT AAGTTCTACA
AACTATATGT ATGGTGCATT TAACTGCCAG TTTGTAGTAG GAAATACAAC TTATAATAAA
CTGCTATCCA ATCACAGAGG TTTATTAAAC ATCCAAAAAG ACAGCGGTCA GAGAATCTTT
ATTAAAATTG GCGACTGCTA TAGACAACTT ACCTTACCTG CTGCCTACGA GATGAATGTT
GCGGGCAGTA CCTGGTATTA TCAGCTAGAC GAGGATGTCT TAATAATTAC CTCCTTTGCA
ATGTATAACC GACCGGAAAT TGTACTAAAA GTTCAGTCTC TTGGGCATAA AAAATATGAT
TTTATTGTTA CTCATCAGCT TACGGTAGGA CCGAATGAGT ATGAAAATGA AATCAAATTG
ACAAGAGAGG GTAATATACT ACAGCTTTCC CCAACCGATC CTGTTGTTAC GAATCATTTT
TATCCTGAAC TTTCGTTCCG AATGAGAATA CCAGAGGACT GTACGTTATC AGACGATAGC
ATTTTCTTTC ATAATAATAC GACGATTAAT CCATCTTTAC TATCGATAGA AATACTTCAA
AAATCCAGCT TTGATATTGT AATGCAAGGA TTTGATACAG GAAATGTAAT TCCATTCTTA
GATCAGTATG ACTATAAAGA ACAGCTTGAA GCTTATCGCA TTTACTATGA TCAATTGGTT
TGTAATTTTA AATTAAGTGC TCCAGACAAA ATTCCACTTT CAGCAGAGAA ACTAAATGCA
ATCATACATT GGTATGCTCA TGATGCCTTA ATCCATTTTG CATCTCCACA TGGTCTTGAG
CAATCCGGTG GTGCAGCATG GGGTACACGA GATGTATGCC AAGGCCCGAT AGAATTTTTC
TTAACTACAG GGCATTTTGA CCTCGTACGA CATATTCTGA TAACTCTTTA CTCCCATCAG
ATAGAGGGGG GATTCGAGTG GCCTCAGTGG TTTATGTTTG ATCATTATCC TATACATCAA
GAAGATTGTC ATGGGGATGT TGTATTTTGG CCATTAAAAG CTATCAGTGA TTATATACAG
GCAACCGGAG ACACCTCCAT TCTAAATGAG CTTGTAGATT ACCGCACTGC GAAAGATGCT
TTGCCTACCA ATCAGCCGGA AACAATACTG ATTCATATCA AGCGTGCTGT CACTACAATA
AAGAATCGTT ATCTATCCGG GACAGCGCTA ATTTCCTACG CTGGTGGAGA CTGGGATGAT
ACCTTGCAAC CAGCCAATAG TGAATTAAAA GAAAATCTGG TAAGCGCCTG GACACAAGCT
CTTGCAGAAC AGACCTTAGA ACTTCTTTGC AGTGCTATTA AGGGTATCGA CCATGATTTT
TCGAAAGAAT TATCTCATAT GGCAAACGAC ATCAGAACAT CCTTCTATCA ATATCTGATA
AAAGACGGGG TTATCGCAGG TTTTCTTTAT AGAGAATCCG AAGAACATAT GAAGTATATG
TTGCATCCGG ATGATACGGA GTCATCCATC CATTATCGAC TACTGCCACT AACCAGAAGT
ATTATAGCAC AATTGGCTGA TTTTAAGTTA GCAACTCGTA ATTTAGAAAT TATCGATGAA
CATCTGGCAT GTCCGGATGG CGTTCGTTTG ATGGACCATC CAGCTAGTTA TAGCGGTGGA
ATCAGTAAAA TATTCTTACG TGCAGAACAA GCAGCAAATG TTGGTAGAGA AATCAGCCTG
CAGTATGTGC ATGCTCACAT TCGCTATATA GAAGCATTAG CAACTATGGG CCTTTCTAAA
AAAGCATGGG ATGCCTTAAT GCGTATTAAT CCGATCTTAT TGACAGATTA TGTACCAAAT
GCCCTTACTC GTCAAAGTAA TGTTTACTTT AGCAGTTCCG AAGGATGCTT TGATGATCGT
TATGAATATG CAAAAAACTT TGATAAACTA AGAACCGGAG ATATTAATGT GAAAGGTGGT
TGGAGGCTCT ATTCCAGCGG TCCTGGTATT TATATCCGAA GAATCATTGC AGATTTGCTA
GGAATTCGTT TCGGCCATAA TGTTATCCAC ATCGATCCTG TTGTTACGAA AGAATTAGAT
GGCGTAACGC TACAATTTAC TTGCTTTGGA AAGACAGTTT TCTTTACCTA TCATGTCGAT
GACACGATGG ATAAACATAT TTGTGTTAAA TCAAATAATA ACATACTGCC TGGAGACAAC
TTAAACAATA TCTACAGAGA CGGTGGCATT CAGATTGCAA AAGATGTTTT CTTATCTGCT
GCTATGAGCG ATAATAATTT TCATATTTAT GTTAAGAACT AA
|
|---|
| Protein sequence | MILKTLSAPI ILENSNSTFT FLPGGDNFEW IHESIMINAF QGNTLDGSTN NLYLRIYKDN
SLAFYPLIGM NSKSTIKSGT STLIFEGTAE DISYTVTFRL TPYGIWFWDI SLSGNCNKAD
IIYSQDIGVG TKGSVNSNEL YLAQYLGHSI FQGDYGYVIC SRQNMAQGDL FPYLQQGSLG
IRSIAYSTDG TQFFGLSYKK TNIPEALYGD LPSKNKQYEL AHTALQTEAF SLSGTKQFSF
YGICKTNHPE VIREIEYIQE LEKAYAYHES GEILPVNVPT LQNIGAPYAS SRWDAKQVEH
YFPKRLLEEK EEEALLSFFT PEKSHVVLQD KELTTERPHG HILMTNFDVT KVPQGVVSST
NYMYGAFNCQ FVVGNTTYNK LLSNHRGLLN IQKDSGQRIF IKIGDCYRQL TLPAAYEMNV
AGSTWYYQLD EDVLIITSFA MYNRPEIVLK VQSLGHKKYD FIVTHQLTVG PNEYENEIKL
TREGNILQLS PTDPVVTNHF YPELSFRMRI PEDCTLSDDS IFFHNNTTIN PSLLSIEILQ
KSSFDIVMQG FDTGNVIPFL DQYDYKEQLE AYRIYYDQLV CNFKLSAPDK IPLSAEKLNA
IIHWYAHDAL IHFASPHGLE QSGGAAWGTR DVCQGPIEFF LTTGHFDLVR HILITLYSHQ
IEGGFEWPQW FMFDHYPIHQ EDCHGDVVFW PLKAISDYIQ ATGDTSILNE LVDYRTAKDA
LPTNQPETIL IHIKRAVTTI KNRYLSGTAL ISYAGGDWDD TLQPANSELK ENLVSAWTQA
LAEQTLELLC SAIKGIDHDF SKELSHMAND IRTSFYQYLI KDGVIAGFLY RESEEHMKYM
LHPDDTESSI HYRLLPLTRS IIAQLADFKL ATRNLEIIDE HLACPDGVRL MDHPASYSGG
ISKIFLRAEQ AANVGREISL QYVHAHIRYI EALATMGLSK KAWDALMRIN PILLTDYVPN
ALTRQSNVYF SSSEGCFDDR YEYAKNFDKL RTGDINVKGG WRLYSSGPGI YIRRIIADLL
GIRFGHNVIH IDPVVTKELD GVTLQFTCFG KTVFFTYHVD DTMDKHICVK SNNNILPGDN
LNNIYRDGGI QIAKDVFLSA AMSDNNFHIY VKN
|
|---|
| |