| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0655 |
|---|
| Symbol | |
|---|
| ID | 5743771 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | + |
|---|
| Start bp | 855418 |
|---|
| End bp | 856191 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 641291767 |
|---|
| Product | GntR family transcriptional regulator |
|---|
| Protein accession | YP_001557781 |
|---|
| Protein GI | 160878813 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1802] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00110649 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAGATG AACAAATGCT GACATCCTTG CAGGAACAAG ATTTGAATAT GGGGGAGTTA
TATCCTGTAT TACGAAGAGC AATTGTTGAA ATGTATTTAG AACCAGGTGC ACTTTTAAGT
ATACGTGATA TTTGTGAACA TTTTAAAATA GGACGTTCTC CTGCTAGAGA TACGCTTCTA
AGGCTGGATC AGGAGGGGCT TGTTACATTA TTACCGCAAC GCGGAACTAT GATTTCTTTG
ATAGATTTAA ATAGAGTAAA TGAAGAGCGT TTTATGCGAT TATCAGTGGA AGAGGCAGTT
ATGAAACTGT TCATGGCTTG TCATACTCCT ACAGACATCA TTTTATTACA AGAGGTTTTA
CGAAAAGAAA ACGAATTACT GGAAATGAAG AATGTTGATA TTAGAAACTT TTTATTGTTG
GATGATCAAT TTCATCAAAT ATTTTATTCT GTAACAAAGA GACTATTTTC TCATCACACC
TTACAAAGTG TTTCAGGGCA TTATAGACGT ATTCGTTTGC TGAGTTTAGA TGATAATAAA
AAATTAACTG AAATTGTAAA ACAACATGAA GGGCTGATTA CTGCGTCCCA GGCGAGGGAT
ACCGAGATGA TGCAGAGTAT TTTTCATTTG CATATTTGTA AATTGGAGCG AGAAGAAGGA
AAAATTGTAA AAAAATTCCC TTATCTTTTC CAAGAATATG AAAATACATC ACACAAAGCG
GATCTATTTT GGGAGGGCGA TTATTTACAG TCAATAAAAA GCTTAGCTCA ATAA
|
|---|
| Protein sequence | MLDEQMLTSL QEQDLNMGEL YPVLRRAIVE MYLEPGALLS IRDICEHFKI GRSPARDTLL
RLDQEGLVTL LPQRGTMISL IDLNRVNEER FMRLSVEEAV MKLFMACHTP TDIILLQEVL
RKENELLEMK NVDIRNFLLL DDQFHQIFYS VTKRLFSHHT LQSVSGHYRR IRLLSLDDNK
KLTEIVKQHE GLITASQARD TEMMQSIFHL HICKLEREEG KIVKKFPYLF QEYENTSHKA
DLFWEGDYLQ SIKSLAQ
|
|---|
| |