Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_0631 |
Symbol | |
ID | 5741680 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | + |
Start bp | 818903 |
End bp | 820117 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 641291743 |
Product | L,L-diaminopimelate aminotransferase |
Protein accession | YP_001557757 |
Protein GI | 160878789 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | [TIGR03542] LL-diaminopimelate aminotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.923394 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTAAAA TTAATGAAAA CTATTTAAAA TTACAAGGTA GTTACCTATT TTCAACAATT GGAAAGAAAG TACGAACCTA TAAGGAAGAA AACCCAGATA AGAACGTGAT TAGTCTAGGG ATTGGTGATG TGACATTACC TCTTGCTCCA AGCATAATAA GTGCACTTCA TAAAGCAACC GATGAAATGG CAGCAAAAGA GACTTTCAAA GGCTACTCCC CAGATCTTGG ATATGAATTT TTACGAAGTG CAATCGCAAA ACATGATTAT GAAGCGAGAG GGGTTCAAAT TGCGCTTGAT GAAATCTTCA TCAGTGATGG TGCAAAAAGT GATTCTGGTA ACATAGGTGA TATATTTGCA GAAAATAATA AGATAGCCGT TTGTGATCCA GTATATCCTG TTTATGTGGA TACGAATGTA ATGGCTGGTC GAACAGGTGA ATTTAATTAC ACTACTGGTA AGTGGAGTAA TGTCATCTAT ATGCCTTGTA CGAAGGAAAA TAAATTTGTA CCGAGCCTTC CAGCGGAAAC TCCTGATATC ATCTATCTGT GTTTTCCTAA CAATCCTACA GGATCTGCAA TCACAAAGAT GAAACTTCAG AAATGGGTAG ATTATGCAAT TGAAAAAGGA GCAGTTATTA TATACGATGC TGCTTATGAG GCATACATTA GCGAAGAGAA TTGTCCTCAT ACCATTTATG AATGTGATGG AGCGAAAAAA TGTGCAATCG AACTTCGTAG CTTTAGCAAA AATGCTGGAT TTACAGGCAC AAGACTTGGT TTTACAATAG TACCAAAGGA GCTAACCAGC GACGGTGTTT CTTTAAATAG TTTATGGGCA AGACGCCATG GCACTAAGTT TAATGGTGCA CCATATATTA TTCAAACAGC TGGAGCTGCA GTTTATTCAC CAGAAGGAAT TGCAGAAACG AGAGAACAGA TAAATTACTA TATGAACAAT GCACGAGTAA TCCGTGATGG TTTACTTGAG GCAGGATATC AGGTATCTGG TGGTGTCAAT GCACCGTATA TCTGGTTACA TACACCAGAT GGCATGACAT CTTGGGAATA CTTTGATTAT TTACTTCAAA ATGCTTCTGT TGTTGGTACA CCAGGTTCAG GCTTTGGACC AAGTGGAGAG GGATATTTCC GACTGACTGC ATTTGGTACG TATGAAAATA CGCTAGAAGC ATTAAGAAGA ATCAAAAATT TATAA
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Protein sequence | MFKINENYLK LQGSYLFSTI GKKVRTYKEE NPDKNVISLG IGDVTLPLAP SIISALHKAT DEMAAKETFK GYSPDLGYEF LRSAIAKHDY EARGVQIALD EIFISDGAKS DSGNIGDIFA ENNKIAVCDP VYPVYVDTNV MAGRTGEFNY TTGKWSNVIY MPCTKENKFV PSLPAETPDI IYLCFPNNPT GSAITKMKLQ KWVDYAIEKG AVIIYDAAYE AYISEENCPH TIYECDGAKK CAIELRSFSK NAGFTGTRLG FTIVPKELTS DGVSLNSLWA RRHGTKFNGA PYIIQTAGAA VYSPEGIAET REQINYYMNN ARVIRDGLLE AGYQVSGGVN APYIWLHTPD GMTSWEYFDY LLQNASVVGT PGSGFGPSGE GYFRLTAFGT YENTLEALRR IKNL
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