Gene Cphy_0631 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_0631 
Symbol 
ID5741680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp818903 
End bp820117 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content38% 
IMG OID641291743 
ProductL,L-diaminopimelate aminotransferase 
Protein accessionYP_001557757 
Protein GI160878789 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID[TIGR03542] LL-diaminopimelate aminotransferase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.923394 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAAAA TTAATGAAAA CTATTTAAAA TTACAAGGTA GTTACCTATT TTCAACAATT 
GGAAAGAAAG TACGAACCTA TAAGGAAGAA AACCCAGATA AGAACGTGAT TAGTCTAGGG
ATTGGTGATG TGACATTACC TCTTGCTCCA AGCATAATAA GTGCACTTCA TAAAGCAACC
GATGAAATGG CAGCAAAAGA GACTTTCAAA GGCTACTCCC CAGATCTTGG ATATGAATTT
TTACGAAGTG CAATCGCAAA ACATGATTAT GAAGCGAGAG GGGTTCAAAT TGCGCTTGAT
GAAATCTTCA TCAGTGATGG TGCAAAAAGT GATTCTGGTA ACATAGGTGA TATATTTGCA
GAAAATAATA AGATAGCCGT TTGTGATCCA GTATATCCTG TTTATGTGGA TACGAATGTA
ATGGCTGGTC GAACAGGTGA ATTTAATTAC ACTACTGGTA AGTGGAGTAA TGTCATCTAT
ATGCCTTGTA CGAAGGAAAA TAAATTTGTA CCGAGCCTTC CAGCGGAAAC TCCTGATATC
ATCTATCTGT GTTTTCCTAA CAATCCTACA GGATCTGCAA TCACAAAGAT GAAACTTCAG
AAATGGGTAG ATTATGCAAT TGAAAAAGGA GCAGTTATTA TATACGATGC TGCTTATGAG
GCATACATTA GCGAAGAGAA TTGTCCTCAT ACCATTTATG AATGTGATGG AGCGAAAAAA
TGTGCAATCG AACTTCGTAG CTTTAGCAAA AATGCTGGAT TTACAGGCAC AAGACTTGGT
TTTACAATAG TACCAAAGGA GCTAACCAGC GACGGTGTTT CTTTAAATAG TTTATGGGCA
AGACGCCATG GCACTAAGTT TAATGGTGCA CCATATATTA TTCAAACAGC TGGAGCTGCA
GTTTATTCAC CAGAAGGAAT TGCAGAAACG AGAGAACAGA TAAATTACTA TATGAACAAT
GCACGAGTAA TCCGTGATGG TTTACTTGAG GCAGGATATC AGGTATCTGG TGGTGTCAAT
GCACCGTATA TCTGGTTACA TACACCAGAT GGCATGACAT CTTGGGAATA CTTTGATTAT
TTACTTCAAA ATGCTTCTGT TGTTGGTACA CCAGGTTCAG GCTTTGGACC AAGTGGAGAG
GGATATTTCC GACTGACTGC ATTTGGTACG TATGAAAATA CGCTAGAAGC ATTAAGAAGA
ATCAAAAATT TATAA
 
Protein sequence
MFKINENYLK LQGSYLFSTI GKKVRTYKEE NPDKNVISLG IGDVTLPLAP SIISALHKAT 
DEMAAKETFK GYSPDLGYEF LRSAIAKHDY EARGVQIALD EIFISDGAKS DSGNIGDIFA
ENNKIAVCDP VYPVYVDTNV MAGRTGEFNY TTGKWSNVIY MPCTKENKFV PSLPAETPDI
IYLCFPNNPT GSAITKMKLQ KWVDYAIEKG AVIIYDAAYE AYISEENCPH TIYECDGAKK
CAIELRSFSK NAGFTGTRLG FTIVPKELTS DGVSLNSLWA RRHGTKFNGA PYIIQTAGAA
VYSPEGIAET REQINYYMNN ARVIRDGLLE AGYQVSGGVN APYIWLHTPD GMTSWEYFDY
LLQNASVVGT PGSGFGPSGE GYFRLTAFGT YENTLEALRR IKNL