| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0617 |
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| Symbol | |
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| ID | 5743531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 802351 |
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| End bp | 804156 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 641291729 |
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| Product | signal transduction histidine kinase, LytS |
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| Protein accession | YP_001557743 |
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| Protein GI | 160878775 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3275] Putative regulator of cell autolysis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000118268 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCGTA AATTATTTAT ACATCGTTTT TTTACATACT TTTCCATACT TTTGATCCCT
ATCATTTTTA CCTTACTTTT TTATTCCTTT GTAACAATTA AGGATTTAAA GCGCCAAGGG
CAAGCGAATA CTGTATCTTC CTTAACCGCA TATAATAGTA TTTTAGAGAC AGCGCTTGGT
AACGCGACCT ATCAAAGCAA TTTATTTACT AGTGCTCCAA GAATCACTCT AAGCTTAAAA
AAAATCTTAT CAAAAAATGA AATGACTTAT TCAGAAATTG TTCTATTTAA TAATTTACAA
GCAATCTTAA ATTCCTCTTT GAATTCAAAT TTGTTTATTG ATTCTATCTA CGTAAGTCTT
GATTTTTATA GTCGATATTT ACGCTCTGGT ATAGGGATTC AAAATATTGC AGAATGTTCT
GATCAGGATT GGTATACAAG GTACCTAGAT TATGATGGTA CTCGTAAAAT TTGGACCTGT
AGAAGAACCT TTTATGAGTA TGGTCGTGAA AAAGAAGTTA TTACTGTTTA CATGCGGCTT
TCTTTAGCAC ACGGTGTATT TGCTGTTAAT CTAGATATAA ATCGTTTGGC AAATTTCTTC
CTGCAGTCAA GCTTTTTAGA GAAGGAACAT ATTATCTTAT TAAATGACAA AAATGAATTG
ATTTTATCGA ATGAGACGAA AGGACTTAAT TTTGACCTTG TAGATTATCT AAATGAGGGA
AAACTAAGTC TAGATGCTTT AGAACAGTTA ACCCCAACCC GTTTTACTCT AAATAATAAA
GAGTATTACA TCACCCTAAA ATCATCGCAT CAGTATGGCT TAAATACATT ATCCATAATT
GCTACAAAAG ATTACAATAT CTTAGGCAAT TATTTTAAAA CTACTATGCT ACTATTAGCT
ATCTGTTGTA TCGTATTAGC ATTATTTATC GCAACACTTA TTACATATAA AAATATACAA
CAGTTTAATC ATCTGATAAC TGTCTTAAGT AATGCTGAGA AGGGGATTTT TCACATAGAG
AATGACAAGC GCTATCGCTT AACTGATGAG TATGACTTAA TCTTTAATGA GGTTATTCAT
ACATTTATTA AAAACGATTA TTTAAAAACA CAAATAGCGG AAAAACAATA TAAAAAGCAA
ACAGCAGAAT TGATTGCATT ACAACTGCAA ATCAACCCGC ATTTCCTGTT TAATACTTTA
CAATTGCTAG ATTTAGAAGC TTATCAACAA ACCAAAGTAC CAACAAGCAT AAATACAATC
ATTCAAGAGC TTTCAACAAT TTTAAAATAT GCGCTAGGTG ATCCGCAATC CATTGTAACG
TTAAGGGAGG AACTTGAGCA TTTAAGAGCT TATGTTGATA TCAATTACCG AAGATACTGT
AATATGTTCA TCGTATACTA CGATTACGAA GAAGAGATTT CAGATTATTA TTTATTTCGA
ATTCTATTAC AACCATTAAT CGAAAACAGT CTATATCATG GGATACGTCC ACTCAATGGT
TCCAGGCAAG GATATATTAA ACTCAAAATT TATGAAAGAG ATAATTACCT TAATTTTTAT
ATTATTGATA ATGGAATAGG CATGGATACC GAAGAATTGC AACAGTTAAA TGAGTTATTG
AAACCATCTG ATATTACGAC TAAACATATC GGACTAGCCA ATACCAATCG AAGGCTGATC
CTAAACTTTG GTATGGATAG TGCGTTAAAG ATCCGAAGTA AGAAAAATTA TGGAACAATT
ATTTCGTTTC GGATACCAGT AATGAAAACT AAGGATGAGT GGGTTGTAAA AGTTTCTTAT
TTCTAG
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| Protein sequence | MKRKLFIHRF FTYFSILLIP IIFTLLFYSF VTIKDLKRQG QANTVSSLTA YNSILETALG
NATYQSNLFT SAPRITLSLK KILSKNEMTY SEIVLFNNLQ AILNSSLNSN LFIDSIYVSL
DFYSRYLRSG IGIQNIAECS DQDWYTRYLD YDGTRKIWTC RRTFYEYGRE KEVITVYMRL
SLAHGVFAVN LDINRLANFF LQSSFLEKEH IILLNDKNEL ILSNETKGLN FDLVDYLNEG
KLSLDALEQL TPTRFTLNNK EYYITLKSSH QYGLNTLSII ATKDYNILGN YFKTTMLLLA
ICCIVLALFI ATLITYKNIQ QFNHLITVLS NAEKGIFHIE NDKRYRLTDE YDLIFNEVIH
TFIKNDYLKT QIAEKQYKKQ TAELIALQLQ INPHFLFNTL QLLDLEAYQQ TKVPTSINTI
IQELSTILKY ALGDPQSIVT LREELEHLRA YVDINYRRYC NMFIVYYDYE EEISDYYLFR
ILLQPLIENS LYHGIRPLNG SRQGYIKLKI YERDNYLNFY IIDNGIGMDT EELQQLNELL
KPSDITTKHI GLANTNRRLI LNFGMDSALK IRSKKNYGTI ISFRIPVMKT KDEWVVKVSY
F
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