| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0579 |
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| Symbol | |
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| ID | 5743493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 745624 |
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| End bp | 747219 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 641291691 |
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| Product | two component AraC family transcriptional regulator |
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| Protein accession | YP_001557705 |
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| Protein GI | 160878737 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins
[COG4753] Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAATTC TAATTGTAGA TGATGAAAAG CTTACCAGAG ACGGTTTAAT AGCAAATATT
AACTGGAAGG CACTCTCATT TGACCAAATT GATCAGGCCG ATGATGGAAT AAATGCAATT
CAGATTGCCC TAAAGCATCC TCCAAATGTT TTATTAACCG ACGTGCGAAT GCCAAGGATG
GACGGAATTG AATTAGTAGA TAATATCCTG AAACTTTATC CAGACTGTTC TGTTATATTT
ATGAGCGGAT ATTCAGATAA AGAATATTTA AAGGCTGCGA TTAAGTTTCG CGCTATCCGT
TATGTAGAAA AACCGATTGA TCCTTCCGAA ATCATGGATG CACTAAAACA GTCTATCCAG
ACTGTCCTAC AACATCAGGC ACAACAAGAT TCTAATGTTT TATACGCAAA GGAGGCTGTG
TCTAGGTTTG CCCAAAGGCT AACACATAAC GGTTATGATA TGAAAAGTGA CACTTTAATT
GATGACGCTG TTTTGAGAGG ATCCATCAAT AATTCAACCA TTTTTACCAC CTGCATCCTT
CGAATTATTT CACCTTATAA TGTGATCGTA GATAGAAGCA ACCTTAGCTC CTATCTTGAA
AATTTTGATA AACAGATAGC AAAATGGCAT TTGAATGAGA TCCATTTTAT TAAAAACGAT
TCACTAATCG TATTACATAT TTACGGAAAC GAACGGCCGG AGGAATCTGT CGTATCCAAA
ATCGGAACAT ACATCAAGTC CGTAATTCCA ATTGAATTGA ACTATTTTAT TACCTTTGGA
AAAACCGTCA CAGGTCCATC AAAAGTATTC GATTCTTATA ATTCCGCAGC TATCCTACTA
CAAAGTTCCT TTTTCTTTGA TTATGGTAGC ATTTTAATCC ATAAAAGTTC ACCTCAATCG
GTTTCAAGCA TCTACCCACA TGAATTTCTT AATGATTTTA CAGAAGCAAT TCGTGAAAAG
AATTTCCTTC GTGCGAGGGA ACTTGTAGAA ACCTTATACC GTTCCTTAAA AAATAATAAA
ACTCTTTTGA CAAATGTCAT TAAAGACATG TACTATAAGG CCTTTTTACA AATTAATTCA
GTTCAATACG ATTTGAAGCT TCAAACAGAA AATGCAGTCT CCGATTCCGA GAGTATGCTC
GATAATATCA CAAACTGTAT CATACTGAAT GAACTTCATC AGATGCTGTT AGCAAAGATT
GATAGATTTG AAGAAAAACT TCAGTCCACA CCCAAAGAAA CCTCGACTAT CTTTTTAATT
CGAGATTATA TTAGTAATCA TTACGGAGAT TATTCCTTAT CCATAAAAGA TATCAGCGAT
CATGTTCGTT TATCCTTCTC TTATCTTTGT ACCGTTTTTA AAACGGAAAC TGGAGAGACA
TTAAATCAGT ACATTACCAA TTATCGTATC GAGAAAGCAA AGCAGCTTCT ATCTGACCCA
CGTAATAAAA TCATTGAGGT TTCCTCACGC GTTGGATATG CTGACAATAA TTATTTCGGT
AAAATATTCA AGAAAATAGT CGGAATCACT CCATCAGAAT ATCGTGAAAA GGAACTGGGC
CGTAATACGT CATTTTATGT TCTGAAAAAA AAATAA
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| Protein sequence | MRILIVDDEK LTRDGLIANI NWKALSFDQI DQADDGINAI QIALKHPPNV LLTDVRMPRM
DGIELVDNIL KLYPDCSVIF MSGYSDKEYL KAAIKFRAIR YVEKPIDPSE IMDALKQSIQ
TVLQHQAQQD SNVLYAKEAV SRFAQRLTHN GYDMKSDTLI DDAVLRGSIN NSTIFTTCIL
RIISPYNVIV DRSNLSSYLE NFDKQIAKWH LNEIHFIKND SLIVLHIYGN ERPEESVVSK
IGTYIKSVIP IELNYFITFG KTVTGPSKVF DSYNSAAILL QSSFFFDYGS ILIHKSSPQS
VSSIYPHEFL NDFTEAIREK NFLRARELVE TLYRSLKNNK TLLTNVIKDM YYKAFLQINS
VQYDLKLQTE NAVSDSESML DNITNCIILN ELHQMLLAKI DRFEEKLQST PKETSTIFLI
RDYISNHYGD YSLSIKDISD HVRLSFSYLC TVFKTETGET LNQYITNYRI EKAKQLLSDP
RNKIIEVSSR VGYADNNYFG KIFKKIVGIT PSEYREKELG RNTSFYVLKK K
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