Gene Cphy_0549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_0549 
Symbol 
ID5743463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand+ 
Start bp708053 
End bp708703 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content39% 
IMG OID641291661 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_001557675 
Protein GI160878707 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0141512 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAAGA TTAGGCTTGA TATGCTTACC CTTGGTGAGA TTAGAACTAA TTGCTTTATC 
GTCAGCAATG AAGATACGAA GGATGCAGTA GTGGTTGATC CAGGGGATGA ATGCGAACGT 
ATTTTAGAAC ATTTAAATCT TAATGAACTC AATATAAAAG CTATTTTATT AACGCATGGC 
CACTTTGATC ATATCATGGC TGCAAGGGAG CTAGCATCTA CGACTAGAGT TTGCATCTAC 
GCATATGAGT CAGAGCGTGA ACTTCTTGCG GATCCGGGGC TTAATTGCTC TTCCATCTTT 
GGAAAGTCAC TTACTTTAGC CCCTGTTGAA AGCTTACATG ACCTGGAGAA AATTCAGTTT 
GCTGATATTG AATTTGTCGT GCTTCATACT CCAGGACATA CGAAAGGCTC TGTATGCTAT 
TACATTCCTG ATGAACAGAT TCTTCTAAGC GGAGATACTC TATTTTTTGA ATCAGTTGGA 
CGTACCGATT TTCCTACTGG AAATAGTGAA GTATTAGTTA AATCGATCAA TGAGAGGTTA 
TTTACCTTAC CAAAAGAAGT TAAGGTATAT CCTGGACATG GCTGTAGTAC AAGCATTGGG 
TATGAGATGC AAAATAATCC GTATGTAAAT GGAGAGGGAA GTTTTTATTA G
 
Protein sequence
MSKIRLDMLT LGEIRTNCFI VSNEDTKDAV VVDPGDECER ILEHLNLNEL NIKAILLTHG 
HFDHIMAARE LASTTRVCIY AYESERELLA DPGLNCSSIF GKSLTLAPVE SLHDLEKIQF 
ADIEFVVLHT PGHTKGSVCY YIPDEQILLS GDTLFFESVG RTDFPTGNSE VLVKSINERL 
FTLPKEVKVY PGHGCSTSIG YEMQNNPYVN GEGSFY