| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0526 |
|---|
| Symbol | |
|---|
| ID | 5743440 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | - |
|---|
| Start bp | 667117 |
|---|
| End bp | 668901 |
|---|
| Gene Length | 1785 bp |
|---|
| Protein Length | 594 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 641291638 |
|---|
| Product | histidine kinase internal region |
|---|
| Protein accession | YP_001557652 |
|---|
| Protein GI | 160878684 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2972] Predicted signal transduction protein with a C-terminal ATPase domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00000253378 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAACGAT TTAAATTATC AAATATCAGC ATATATAAAA AACTCTTAGC TGCCTTCGTT
ATTATCATCA TATTACCTCA AATAACCTCC TACTTAATTG CAGAACAATC CAGCAAAAAT
CTGATTGTTG GACAGCTATC TTCTGAAACC ATGAGTTCTT TACAGATGGC TTCCGATAAT
ATTAATACTC TATTAAAGCG AATGACCTCC ATCGCATTGT TTGTAAATTC AGATAAAAAT
ATCAAAGGTC TCATTGAAGA TGAAACAACT GCGGATAACT TGAAAAATTT AGATCGGATA
AATAAATTTA ACAGCTTTAT TGAAAATATT GCTTATAATA TGATGGGGAC AAGGTGTTAC
ATTACGGTAA TCACTAAATC CGGTAATCGT TATACAAATT GGAACAGCAG TGGCCCTAGT
TCTTCTGCTT TCCTTGAAAA ATACACACCA GCTAACCTGC AGAATAAGTC TCCTGGTTTT
ATCTGGAGCT TTCTTGATGA AAATTATATT GACAGTGATA AAAAAGCCTA TCCGTATATC
TTAACTCTTG TAAAAAATAT ATACGATAAT TCAGGAAAGA AATTATACGG TACTTTTATT
ATCAGTATAC CAGAAATCGA ACTAAGTAAT TTAACCGTCT CTTCCAGTGA ACAACCAAAG
ACGCAACGAG CAGTAATAGA TAAAAATAAT ATCGTAATCT CCTCCAACCA AAAAGAATGG
ATTGGTAAAC CCTTATCAGA TATTATAAGC ACTAACATCC CCGAAGAGCC TAAGGGTTAT
TTTATTACAA AAGGCGACTC AGAGAATATT ATTTCTTATT CTCACTTGGA TTCTATGACA
ATTATAGACG TAAAATCTTA TGATTCCATA ACAAAACAGC TTCGAGTCAC TACAAATCGC
CTTTTGCTAT TTAATTTCTT TTTTATTTTG CTGTATTTAT TTATATCTGC TTTAATTGCT
AAAAATCTAG TTAATCCGAT ACATCGATTA AGTAAGAAGA TGCTTGATAC TAACTTTGAA
TCCCCTATTG AAGAACCGCC AAAAAAACGA ATGGATGAAA TCGGAATTCT GGAAAATACC
TTTTATATTA TGCGGGAAAA TATCTATAAG CTAATTCAGG ATAATCAAGA AAAAGAGAAA
AAGAAACGGG AAAGTGATAT GAAATTCCTG CAATCTCAAA TCAGCCCGCA TTTTTTATTC
AATACCCTAA ATACAATACG ATGGGCAGGC ATCAATAATA ATAACCAAAA GGTAGCAGAT
ATGGTCCTTG CTTTATCAAA CTTACTAAGA ATGACAATAG TAAAAGAGAA TGACCTAATT
ACCATATCGG AAGAAATTAA TACTTTAAGA AGTTATGCCC TCATCATACA AATGAGACAT
TCTACACAAT TTGAACTGAT CTGTAATTTA CCAGAGGAAC TTTTGACTTA CCACATTCCA
AAACTACTTT TACAGCCTAT TGTTGAAAAC TCTATTATAC ACGGATTTGA AAATATAGAT
AGCGAAGGAA TTATTGAGAT AAGTAGCAGA ACAGAAGACC AGTTTATGAT TCTATCAATC
ATTGACAATG GCGCCGGAAT GGACCTTAAT TCATTCGATG GAAAAAACAA AAAAGAATTT
AAATTCTCTG GTATTGGAAT TAAAAATATT GATGAACGTA TAAAGATATA TTTTGGTGAT
AAATATGGGA TTAAAATAAC CAGTAGCATT AATCAAGGAA CAACCGTTGA GTTATGGCTC
CCATCTCATG ATATTTATAA TGATCGAAAG GAAGAATCGA TTTGA
|
|---|
| Protein sequence | MERFKLSNIS IYKKLLAAFV IIIILPQITS YLIAEQSSKN LIVGQLSSET MSSLQMASDN
INTLLKRMTS IALFVNSDKN IKGLIEDETT ADNLKNLDRI NKFNSFIENI AYNMMGTRCY
ITVITKSGNR YTNWNSSGPS SSAFLEKYTP ANLQNKSPGF IWSFLDENYI DSDKKAYPYI
LTLVKNIYDN SGKKLYGTFI ISIPEIELSN LTVSSSEQPK TQRAVIDKNN IVISSNQKEW
IGKPLSDIIS TNIPEEPKGY FITKGDSENI ISYSHLDSMT IIDVKSYDSI TKQLRVTTNR
LLLFNFFFIL LYLFISALIA KNLVNPIHRL SKKMLDTNFE SPIEEPPKKR MDEIGILENT
FYIMRENIYK LIQDNQEKEK KKRESDMKFL QSQISPHFLF NTLNTIRWAG INNNNQKVAD
MVLALSNLLR MTIVKENDLI TISEEINTLR SYALIIQMRH STQFELICNL PEELLTYHIP
KLLLQPIVEN SIIHGFENID SEGIIEISSR TEDQFMILSI IDNGAGMDLN SFDGKNKKEF
KFSGIGIKNI DERIKIYFGD KYGIKITSSI NQGTTVELWL PSHDIYNDRK EESI
|
|---|
| |