Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_0525 |
Symbol | |
ID | 5743439 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 665552 |
End bp | 667120 |
Gene Length | 1569 bp |
Protein Length | 522 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 641291637 |
Product | two component AraC family transcriptional regulator |
Protein accession | YP_001557651 |
Protein GI | 160878683 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4753] Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGATTAGAA CAATTATTGT AGAAGACGAT ATTGAAATGT TAAATGGCTT ACTTCATATC ATCGCTTGGG AAGATTACGG ATACCTTATT GTAGGTAAGG CAGAGAATGG AGCCGAGGCA CTTAACATTG TAAAAGAAAA ATCACCCGAT TTGATAATCA CAGATATTAC AATGCCGAAA ATGAATGGTC TCGACTTAAT CAAATCAGCA AAGGAATTTA AATCTGGTAT TAAAAGTATT ATCATTAGCT GTAATGAAGA TTTTAATTAT GCGAGAGAGG CAATTAAATT GGAGGCAGAT GATTATATTC TAAAACACAC TCTTACAAAA GAAAGTTTGA TTAATACCTT GGAACAGTTT CGAAGAAAGT TTGTTGAAGA ACGTCAGCAG CAAACATCTT TTGAAGACGC TATCCATAAA CTAAAAGCTA ATAAATTCAT TCTGTTAGAA CAGTTTTTCT CCGATATATC GGAAGGAATA CTAGCACGGG ATCAGGAGAT ACTTCATCAG GCTAAAAAAA TGAATGTTAA ACTTCCTGAA AAAAACATGA GAATAATATC ACTGTACATT GATAACTTAG AAAGTGTCAT CACCGATCAC CCAATTAAAG AATACAGCCT TTTAAAATTT GCTTTTCTAA ATGTAATGGA AGAAACTATT GATAATAGAG ATGGAATTAT TCTTTTCCCT TACAACAGGG GTGCGTTTGG AATTCTTTAT GATGATACCC TCATTTCCAC CAATACTGTG CAGCAATTGA TTAAGAAATT AATATCCAAT GCTACTTCCT TTTTACGCCT ACCTTTATCC GCTTGCTTTA GCAATGTTTT TCATTCCGTG AAGGATATTG GAAAAATACT CAGGCAAAAC GAAGTCCTTC GCTCCTATTA TTTTTATAGC GGTTCTTTAC AGATTATTAC GGAGCCCCCA CTTGATGCTT ATCCTATCGC TGATTTATAT CAAACCTATG GTGCTGATTT TAAGTATCTT TTGAGTTTAC AAAATAAGAT ACGTTTAAAG AAATATACAG AAGATTTATT TTCTCGTTTG GAATCAACGA AATATGATTC CAATTCTGTG AAACAACTTT TACGTCGTTT AGAAATTGAT ATGAGGCTAT TTCTTGAAAA ATATCAAATC AATCTTTGTA CCTTTTCCTT GGATGGTGAC ACTTTTGACC ATTTTAAAAA GATATTTTTT GATATGATTG ATTGTATGTT TGAACAGCTT TCCAAACCGG AAAATAAATC TAGCCGTCCG GAAATAAAAA AAGTACTAGC TTATATCAGT ACTCATATCG GAGAAGAGAT TACTTGTGAT AACATGTCAA GCTATATCAA TATGAATAGC AATTACTTTA GCAGATTATT TAAAAATGAA ATGGGGGTTA GCTTTTCAGA ATATCTTCTT AATAAGCGTA TTCATATAGC TACTGAATTA TTGAAAAATT CTGACTGCCC AATTCATGAG ATATCAAGAA TCGTCGGATT CGAAAGCCCT AGTTATTTCC ATCGAGCTTA TAAAAAAGTC ACGGGGATTA CCCCAGGAGA TGCTAGAGAA CCCAAGTAA
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Protein sequence | MIRTIIVEDD IEMLNGLLHI IAWEDYGYLI VGKAENGAEA LNIVKEKSPD LIITDITMPK MNGLDLIKSA KEFKSGIKSI IISCNEDFNY AREAIKLEAD DYILKHTLTK ESLINTLEQF RRKFVEERQQ QTSFEDAIHK LKANKFILLE QFFSDISEGI LARDQEILHQ AKKMNVKLPE KNMRIISLYI DNLESVITDH PIKEYSLLKF AFLNVMEETI DNRDGIILFP YNRGAFGILY DDTLISTNTV QQLIKKLISN ATSFLRLPLS ACFSNVFHSV KDIGKILRQN EVLRSYYFYS GSLQIITEPP LDAYPIADLY QTYGADFKYL LSLQNKIRLK KYTEDLFSRL ESTKYDSNSV KQLLRRLEID MRLFLEKYQI NLCTFSLDGD TFDHFKKIFF DMIDCMFEQL SKPENKSSRP EIKKVLAYIS THIGEEITCD NMSSYINMNS NYFSRLFKNE MGVSFSEYLL NKRIHIATEL LKNSDCPIHE ISRIVGFESP SYFHRAYKKV TGITPGDARE PK
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