| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0376 |
|---|
| Symbol | |
|---|
| ID | 5742244 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | + |
|---|
| Start bp | 478875 |
|---|
| End bp | 480161 |
|---|
| Gene Length | 1287 bp |
|---|
| Protein Length | 428 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 641291488 |
|---|
| Product | trigger factor |
|---|
| Protein accession | YP_001557502 |
|---|
| Protein GI | 160878534 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
|---|
| TIGRFAM ID | [TIGR00115] trigger factor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.119844 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTTCA AGGTGGAAGA TTTAGGAAAG AATATGGTAA AGCTAACAAT AGAAGCGACA
GCAGAGGATT TTGACAAGGC AATTGAACAG GCTTACCAGA AAAATAAGGG CAAAATGAAC
GTGCAGGGAT TCCGTAAAGG AAAAGCACCA CGTGCAATCA TCGAGAAGAT GTATGGTGTA
GGTGTATTCT ATGAGGATGC TGCTAATTTT ATTATTCCAG AAGCTTATGA GCAGGCTATC
GAAGAAAGTA AATTAGATGT TGTAGCAAGA CCAGAAATCG ACGTTGTTCA GGTTGAGAAG
GGTCAGCCAT TTATCTTCAC AGCTGAAGTA GCAGTTAAGC CAGAAGTAAC TCTTGGCGCA
TACAAGGGTG TAGAAGTTTC TAAGTCTGAA ATCGAAGTAA CAGAAGATGA GATTATGGCT
GAGCTTGATA AGGTGAGAGA GCAGAACTCT AGAACAATTA CAGTTGAAGA TAGAGCAGTA
ATGGATAAAG ATATCGTTAC TATCGATTTT GAAGGTTTCG TTGATGGTGT AGCTTTCGAA
GGTGGTAAGG GCGAAGATTA TGCATTAACA ATCGGTTCTC ATTCCTTTAT TGATACATTC
GAGGATCAAT TAGTAGGCAA GAACATCGGT GAGGATGTAG AAGTTAATGT TACATTCCCA
ACTGAGTATC ATGCAGCAGA TCTTGCTGGA AAGCCAGCAT TATTTAAAGT AAAAGTAAAA
GAAATTAAAG CAAAAGAACT TCCAGCAGCA GATGATGAGT TTGCAGGGGA TGTTTCCGAG
TTTAATACTT TAGAAGAATA TAAAGCTGAT CTTAAGAAAT CTTTAACTGA GAAGAAGGAT
AAGGCAGCAA AGACAGCAAA AGAAGATGCA GTAGTTGATA AGGTAATCGA AAATGCAACT
ATGGAAATTC CAGATGCTAT GGTAGATACT CAGAAGCGTC AGATGGCTGA AGATTTTGCT
CAGAGATTAA AGATGCAAGG TCTTTCTTTA GAGCAGTATT TCCAGTTCAC AGGTTTAAAT
CCAAATACAT TTATGGAGAA CCTTGGACCA CAGGCTCTTA AGCGTATCCA GAGCAGACTT
GTATTAGAAG CAGTTGTTAA GGCTGAGAAT ATTACAGTAT CTGTAGAAGA AATTGATAAA
GAACTTGCAG AGATGGCTTC CGCTTACCAG ATGGAAGTTG ACAAATTAAA AGAGTTAATT
GGCGAGAAGG AAAAAGAACA GATCGTTATG GATATGGCAG TTCAAAAAGC CATTGATCTT
GTAGCAAGTG AAGCAAAGGA AGTTTAA
|
|---|
| Protein sequence | MSFKVEDLGK NMVKLTIEAT AEDFDKAIEQ AYQKNKGKMN VQGFRKGKAP RAIIEKMYGV
GVFYEDAANF IIPEAYEQAI EESKLDVVAR PEIDVVQVEK GQPFIFTAEV AVKPEVTLGA
YKGVEVSKSE IEVTEDEIMA ELDKVREQNS RTITVEDRAV MDKDIVTIDF EGFVDGVAFE
GGKGEDYALT IGSHSFIDTF EDQLVGKNIG EDVEVNVTFP TEYHAADLAG KPALFKVKVK
EIKAKELPAA DDEFAGDVSE FNTLEEYKAD LKKSLTEKKD KAAKTAKEDA VVDKVIENAT
MEIPDAMVDT QKRQMAEDFA QRLKMQGLSL EQYFQFTGLN PNTFMENLGP QALKRIQSRL
VLEAVVKAEN ITVSVEEIDK ELAEMASAYQ MEVDKLKELI GEKEKEQIVM DMAVQKAIDL
VASEAKEV
|
|---|
| |