Gene Cphy_0362 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_0362 
Symbol 
ID5742222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp461569 
End bp463122 
Gene Length1554 bp 
Protein Length517 aa 
Translation table11 
GC content37% 
IMG OID641291466 
ProductABC transporter related 
Protein accessionYP_001557488 
Protein GI160878520 
COG category[R] General function prediction only 
COG ID[COG0488] ATPase components of ABC transporters with duplicated ATPase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0008233 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTATAT TAAATGTATC GAACCTAAAT CATGGTTTTG GTGAGCGAAT GATTTTTCAC 
GATGTATCCT TCCGTCTGTT AAAGGGGGAA CATATTGGGC TTATCGGAGC AAATGGTGAA
GGTAAATCTA CTTTTATGAA TATTATTACC AATAAACTTA TGCCAGATGA AGGTACGATT
GAATGGTCAA AAAATGTTCG CGTTGGCTAT CTTGATCAGC ATTCTGTACT AGAAAAAGGA
ATGTCAATCC GCGATGTACT AAAATCTGCT TTTAACTTCT TATTTGAATT AGAATCTAAA
ATGAATTCCA TCTGTAATGA ATTAGCGGAT GCCTCCGATG AAAAGATGGC AGAGCTTATG
GAGGAGTTCG GTACGATTCA AGACCTTTTA GACGCTCATG ATTTTTATAT TATTGACTCC
AAGGTAGAAG AAATCGGACG AGCTCTTGGA CTTACCGATA TTGGCTTGGA TAAAGACGTT
ACTGACCTAA GCGGTGGTCA AAGAACTAAA GTCTTATTAG GTAAATTACT TCTTGAAAAG
CCAGACATTC TACTTCTCGA TGAGCCTACA AACTACTTGG ACGTAGAACA CATTGAATGG
CTTAAGCGCT ATTTACAAGA GTATGAAAAC GCATTTATCT TAATCTCACA TGATATTCCA
TTCTTAAATA GTGTAATTAA TCTTATTTAT CATATGGAAA ACGGTGAATT AAATCGTTAT
GTTGGAGATT ATGATAAGTT CCAAGAAGTT TACGCAATGA AAAAATCACA ATTAGAAGCT
GCTTATAAAA AGCAACAACA AGAAATTAGC GAACTACAAG ACTTTGTTGC CCGCAATAAA
GCGCGTGTAT CTACCCGTAA CATGGCAATG TCTCGTCAGA AAAAACTAGA CAAGATGGAT
GTTATTGAGC TAGCTAAAGA AAAACCAAAG CCAGAGTTTC ATTTTAAAGA AGCTCGTGCT
GCAAGCCGTT ACATCTTCCA GACAGAGCAT TTGGTTATTG GTTATGATGA ACCACTATCA
CAGCCAATCA CTCTTTCTAT GGAGCGCGGC GATAAAATTA TCTTAAAAGG TGCGAATGGT
ATCGGAAAAA CAACATTGAT GAAGAGTATC TTAGGAATTA TACCTTCCTT AAGCGGTAAT
GTAACCCTAG GCGACTACCT TTATCAAGGA TACTTTGAGC AAGAGATGAC AGGTGCGAAA
AATAATACCT GTATTGAAGA ACTCTGGCGT GAATTCCCAT CCTGGACACA GTATGAAGTA
CGTTCTGCTC TTGCAAAATG TGGACTTACA ACAAAGCACA TTGAAAGCCA AGTACGCGTA
TTAAGCGGTG GAGAACAAGC AAAAGTTAGA CTTTGTAAGC TAATCAACCG AGACACTAAT
ATTTTGCTCC TTGACGAACC TACGAACCAT CTAGATGTGG AGGCAAAGGA CGAATTGAAA
CGTGCTCTTA GCGAATATAA AGGAAGCATC TTATTAATCT GTCATGAGCC AGATTTTTAT
GAAAATTTCG CTACAAAAGT TATCGATTGT AGTAATTGGT CAACTAAGAT TTAA
 
Protein sequence
MSILNVSNLN HGFGERMIFH DVSFRLLKGE HIGLIGANGE GKSTFMNIIT NKLMPDEGTI 
EWSKNVRVGY LDQHSVLEKG MSIRDVLKSA FNFLFELESK MNSICNELAD ASDEKMAELM
EEFGTIQDLL DAHDFYIIDS KVEEIGRALG LTDIGLDKDV TDLSGGQRTK VLLGKLLLEK
PDILLLDEPT NYLDVEHIEW LKRYLQEYEN AFILISHDIP FLNSVINLIY HMENGELNRY
VGDYDKFQEV YAMKKSQLEA AYKKQQQEIS ELQDFVARNK ARVSTRNMAM SRQKKLDKMD
VIELAKEKPK PEFHFKEARA ASRYIFQTEH LVIGYDEPLS QPITLSMERG DKIILKGANG
IGKTTLMKSI LGIIPSLSGN VTLGDYLYQG YFEQEMTGAK NNTCIEELWR EFPSWTQYEV
RSALAKCGLT TKHIESQVRV LSGGEQAKVR LCKLINRDTN ILLLDEPTNH LDVEAKDELK
RALSEYKGSI LLICHEPDFY ENFATKVIDC SNWSTKI