Gene Cphy_0337 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_0337 
Symbol 
ID5742183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp423685 
End bp425433 
Gene Length1749 bp 
Protein Length582 aa 
Translation table11 
GC content35% 
IMG OID641291427 
ProductABC transporter related 
Protein accessionYP_001557463 
Protein GI160878495 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCCCA GAGCAAAAAA ATTCTTATCT TATTATAAAC CGTATTGGAA ACTATTTTTA 
GCAGATATGC TATGTGCATT AACTGCTGCT GGTATTTCCT TGGTTTATCC GTTAATCGTT
CGTTACATTA CACAGGATGT ATTAGTTAAC AACGAAATTA ATCAAGCAAT ACAAATAATT
ATACGAATGG CAGCTGTGCT AATCGGATTG GCAATACTTG AATTTGGATG TAACTTCTTT
ATTGCTTATA AAGGACATAT CATGGGTGCA AAGATGGAAT ATGATATGAG AAATGAAATC
TTTGGACATT TCCAAAAGCT ATCCTTTAAC TTTTATGATA ATCAAAAAAC AGGGCAATTA
ATGACTCGTA TCACAAACGA TTTGTTTGAT ATCACCGAAC TATGCCACCA TGGCCCTGAA
GATATTGTAA TCTCAATTAT CAAATTCGTT GGTGCATTTA TTATCTTAGT TCGTATTAAC
TGGAAATTAA CCATCATACT TTTCTTGTTC ATTCCGATGA TGTTTATATT TGCTTACATT
ATGAAAGGTC GAATGAACCG TGCTTTTCGT AAAAACCGTG AGAGAATTGC AGATATCAAT
GCACAGATTG AAGATAACTT ATCCGGAATT CGTGTAGTAA AATCTTTTGC CAATGAAGAT
TGTGAGACCT CGAAGTTTGA TGCAGGTAAC AAGCGTTTCG TCGATAGTAA GAGTCATGCA
TATTGGCAAA TGGCAACCTT TCATTCTGGA CTTTCGTTCT TTACAAATCT TATTAATGTT
GCTGTGATTG TTGGTGGCGG AATATTGATT GCACTCAGTG GAATTCTGCT AAGTGATATG
TTAACCTTTA TGTTATATGT TAATAATATC ATAGAGCCAA TACGTAAACT GATTAACTTT
ACAGAACAAT TCCAAAATGG TGTCACAGGA TTTAGCCGAT TTATGGAGAT AATTGAGACG
AATCCGGATA TCGTAGATTC ACCAGATGCA AAAGAACTGA AAAATGTTCG TGGAGATATT
AGCTTTGAAG AGGTATCTTT TAAATATCAA GATACAACCA GCGAAGTATT TAGAAATATC
AATCTGCAGG TACCAGCTGG TGAATATATT GCACTTGTAG GTTCCTCAGG TGTAGGAAAA
ACAACCATGT GTAGCTTAAT CCCTAGATTT TATGAAGTAA GCACAGGAAG AATTACAATT
GATGGACAGG ACATTCGTAG CCTAACTCAA AAATCCTTAC GAAAAAACAT AGGAATTGTG
CAACAGGATG TTTATCTTTT CGCAGGAACA GTTGCAGATA ATATCCGCTA TGGCGATTTA
GATGCTACCA TGGAGGAAGT TATTGAAGCA GCAAAGAATG CAAATGCACA TGAATTCATT
ATGAATCTTC CGGAAGGATA CAACACCTAT ATTGGACAGC GTGGTGTGAA ACTATCGGGA
GGACAAAAAC AAAGACTAAG CATTGCAAGA GTATTTTTAA AGAACCCACC TATCCTAATC
TTTGACGAGG CGACATCAGC GCTTGACAAT GAGAGTGAAA AGATAGTTCA AGAGTCTTTA
GAAAAATTAG CAAAAAACAG AACCACCTTT GTTATTGCTC ATCGATTAAC AACGATAAAA
AATGCGAGAA ACATTATCGT ATTAACAGAA GAAGGTATCA AAGAACAAGG AACTCATGAA
AAGCTGTTAT CGTTAGACGG TATTTATGCC TCCCTTTATC ACTTGAATTA TGAAAAGCAG
CAGGCATAA
 
Protein sequence
MNPRAKKFLS YYKPYWKLFL ADMLCALTAA GISLVYPLIV RYITQDVLVN NEINQAIQII 
IRMAAVLIGL AILEFGCNFF IAYKGHIMGA KMEYDMRNEI FGHFQKLSFN FYDNQKTGQL
MTRITNDLFD ITELCHHGPE DIVISIIKFV GAFIILVRIN WKLTIILFLF IPMMFIFAYI
MKGRMNRAFR KNRERIADIN AQIEDNLSGI RVVKSFANED CETSKFDAGN KRFVDSKSHA
YWQMATFHSG LSFFTNLINV AVIVGGGILI ALSGILLSDM LTFMLYVNNI IEPIRKLINF
TEQFQNGVTG FSRFMEIIET NPDIVDSPDA KELKNVRGDI SFEEVSFKYQ DTTSEVFRNI
NLQVPAGEYI ALVGSSGVGK TTMCSLIPRF YEVSTGRITI DGQDIRSLTQ KSLRKNIGIV
QQDVYLFAGT VADNIRYGDL DATMEEVIEA AKNANAHEFI MNLPEGYNTY IGQRGVKLSG
GQKQRLSIAR VFLKNPPILI FDEATSALDN ESEKIVQESL EKLAKNRTTF VIAHRLTTIK
NARNIIVLTE EGIKEQGTHE KLLSLDGIYA SLYHLNYEKQ QA