| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0333 |
|---|
| Symbol | |
|---|
| ID | 5742179 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | + |
|---|
| Start bp | 416274 |
|---|
| End bp | 416531 |
|---|
| Gene Length | 258 bp |
|---|
| Protein Length | 85 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 641291423 |
|---|
| Product | phosphotransferase system, phosphocarrier protein HPr |
|---|
| Protein accession | YP_001557459 |
|---|
| Protein GI | 160878491 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1925] Phosphotransferase system, HPr-related proteins |
|---|
| TIGRFAM ID | [TIGR01003] Phosphotransferase System HPr (HPr) Family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTTCTA AGAAAATTGT TATTAAAATA CCAACAGGAT TAGAGGCTAG ACCGGTAGCG
TTATTGGTTC AGGTAGCCAG CCAGTATGAA AGCAACGTTT ATGTAGAATG TGAAGAGAAA
AAAGTAAATG CGAAGAGTAT TATGGGGATG ATGAGTCTCG GGCTTCCAGC CGGAGAGGAA
ATCAATGTAA TCGTAGATGG TTCCGATGAG GAAGTTGCGA TGGAAAACAT TGAAAAATAT
CTTTGTGGAA ATAAATAA
|
|---|
| Protein sequence | MISKKIVIKI PTGLEARPVA LLVQVASQYE SNVYVECEEK KVNAKSIMGM MSLGLPAGEE
INVIVDGSDE EVAMENIEKY LCGNK
|
|---|
| |