Gene Cphy_0319 details

Gene Information

• Locus tag: Cphy_0319
• ID: 5744242
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium phytofermentans ISDg
• Kingdom: Bacteria
• Replicon accession: NC_010001
• Strand: +
• Start bp: 398539
• End bp: 399117
• Gene Length: 579 bp
• Protein Length: 192 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 641291409
• Product: glycerol-3-phosphate responsive antiterminator, GlpP
• Protein accession: YP_001557445
• Protein GI: 160878477
• COG category: [K] Transcription
• COG ID: [COG1954] Glycerol-3-phosphate responsive antiterminator (mRNA-binding)

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATGTTA ATATGAAACA TACATTTACA AAAACACTGG AAGATTGTCC AGTCATTGCT 
GCATTAAAAG ATAATGAGGG GTTAGAACAA TGTCTTTCGT CTGAGAGTAG CACTGTATTT 
ATCTTGTATG GAGATATCCT TACAATTTCA GATATTGTTA ATCGCGTGAA GGAATGTGGA 
AAACTTGCTA TGGTTCATGT AGATTTGATA TCAGGACTTA GTTCGAAAGA AATTAGTGTT 
GACTTTATTA AAAAGCATAC AAAGGCAGAC GGAATTATAT CGACAAAACC AATGCTAATT 
AAGAGGGCAA AGGAATTATC GTTATACACA GTTTTACGCT TTTTTGTGAT TGATTCCATG 
GCTTACGAGA ATATTGAAAA ACAATGTATG AATGTAAAAC CAGATTGTAT TGAGATTCTT 
CCTGGAATTA TGCCTAAGGT AATAAAAAAA ATCTGTAATA CTAGGGATAT ACCTGTAATT 
GCAGGTGGTT TAATATCAGA CAAAGAGGAT ATAATGCAAG CTTTAGATGC TGGGGCTGTA 
TCTATTTCAA CAACCAACCC TAAGGTCTGG TTTATGTAA 

 

Protein sequence

MDVNMKHTFT KTLEDCPVIA ALKDNEGLEQ CLSSESSTVF ILYGDILTIS DIVNRVKECG 
KLAMVHVDLI SGLSSKEISV DFIKKHTKAD GIISTKPMLI KRAKELSLYT VLRFFVIDSM 
AYENIEKQCM NVKPDCIEIL PGIMPKVIKK ICNTRDIPVI AGGLISDKED IMQALDAGAV 
SISTTNPKVW FM