Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_0256 |
Symbol | |
ID | 5744179 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | + |
Start bp | 315431 |
End bp | 318007 |
Gene Length | 2577 bp |
Protein Length | 858 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 641291346 |
Product | preprotein translocase, SecA subunit |
Protein accession | YP_001557382 |
Protein GI | 160878414 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000954938 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGATTAA TAAAGAAAAT ATTTGGAACA CATAGCGAAC GAGAGATAAA ACTTATCCGC CCTACTGCAG ATAAGATAGA GGCATTAGAA CCGGATATGA TGAAACTTTC GGATGATGAA TTAAGAGGTA AAACTATAGA GTTTAAAAAT CGTTTGAAAA ATGGTGAGAC ATTAGACGAT ATCTTAGTGG AAGCTTATGC AGTAGTTCGA GAAGCTGCGA AGAGAACTCT TGGTAATAGA GCTTATTATG TTCAGCTATT AGGCGGTATC ATTCTTCATC AGGGAAGAAT CTCTGAGATG AGAACTGGTG AAGGTAAGAC ACTTACATCT ACATTTCCAG CATATCTTAA TGCACTTGAA GGAGAAGGCG TACACATCGT AACAGTAAAT GACTATCTTG CAAAGCGTGA CGCTGAGTGG ATGGGTGAAG TTCATCGTTT CCTTGGTTTA AGTGTTGGAT GTATCTTAAA CGATATGGAT AATGACGAAA GAAGAAAAGC ATATAACTGT GATATTACTT ATGCTACAAA CAATGAATTA GGTTTTGATT ACTTAAGAGA TAACATGGTT ATTTATAAAG AACAGCTTGT TATGAGAGAT TTGCATTTTG CTATCATCGA TGAGGTTGAC TCTGTATTAA TCGATGAGGC TAGAACTCCT CTTATAATTT CAGGTCAAAG TGGAAAATCA ACTAGACTGT ATGAAGCATG TGATATCTTA GCTCGCCAGT TAACTAAAGG TACTGCGAAA GAACTTTCTA AGATGGATAT CATCATGAAA GAAGATGACC AAGAAACTGG TGATTTTGTT GTAAATGAGA AAGAGAAGGC TGTAAACCTT ACCGCAGAGG GTGTAGAAAA AGTAGAGCGC TTCTTTAAGA TAGAAAACCT TGCAGATCCT GAGAATCTTG AAATTCAACA TAATATTATC TTAGCATTAC GTGCTCATTA CTTAATGGCA ATCGATAAAG ATTATGTAGT TAAGGATGAC GAAGTATTAA TCGTAGATGA CTTTACTGGA CGTATTATGC CTGGTAGAAG ATATTCTGAC GGTTTACACC AAGCGATTGA AGCGAAGGAA CATGTAAAGG TAAAGAGAGA AAGTAAGACT CTTGCGACAA TTACATTCCA GAACTTCTTC AATAAATACA CGAAAAAATG TGGTATGACT GGTACTGCGT TAACCGAAGA AAACGAATTC CGTGAAATCT ATGGCATGGA CGTTGTGGAA GTACCAACCA ATCGTCCTGT TGCCCGTATT GATAAAGATG ACGCTGTTTA TCGTACTAAG AGAGAAAAAT TGAATGCAGT TATCAATGCA ATCGTAGAAG CTCATAAGGC AGGACAGCCG GTGCTCGTTG GTACTATTAC AATCGAAGCA TCCGAAGAAA TCAGTGAATT ATTAAAGAAA AAGAATATTC CTCATAAGGT ATTGAATGCG AAGTTCCATG AACTAGAAGC GGAAATTATC GCAGACGCAG GTCAAAAAGG TGCTGTAACC ATAGCAACCA ACATGGCTGG TCGTGGTACT GATATCAAGC TTGGAGAAGG TGTAACAGAA CTAGGTGGTC TTAAGATAAT CGGTACAGAG CGTCATGAAT CCAGACGTAT TGATAACCAG TTACGTGGTC GTTCCGGTCG TCAGGGTGAC CCAGGTGAAT CTTGTTTCTA CATCTGTTTG GAAGATGATT TAATGCGTTT GTTTGGTTCA GAACGTTTAA ATACAATCTT TAAGTCACTT GGTTTACCAG AAGGTGAGCA GATCGAGCAT AAGATGTTAA GCGGTGCTAT TGAGAAGGCA CAAAAGAAGA TAGAGGATAA TAACTTTGGT ATCCGTAAGA ATCTTCTTGA GTACGATAAA GTAAATAATG AGCAACGTGA GATTATCTAC GCTGAAAGAA GGAAAGTATT AAACGGCGAT AGTATGAGAG ATGTTATCTT TAAGATGATT ACAGATAACG TAGAAACCTG CGTAAATACT AGCATTAGCG ACGACCAGCT TCCAGAAGAA TGGGATTTAG CAGAATTAAA TCAGATGTTA CTTCCGATTA TTCCAATGGA GCCTGTGGAG TTAAAAGATA ATGAATTAAG ACATATGAAG AGAAATGAAT TAATTCATAT GTTAAAGGAA AAAGCAGTTA AGTTATACGA AGAGAAGGAA GCAGAATTCC CAGAGAAAGA ACATTTAAGA GAAGTGGAAC GTGTTGTACT TCTTCGTGTG ATTGACCGTA AATGGATGGA TCATATCGAT GATATGGATC AGTTACGTCA AGGTATTGGC TTACAGGCAT ATGGTCAGAG AGATCCTAAG ACAGAATATA AGTTTAGCGG TTTTGAAATG TTTGACACCA TGATTAATGC CATTACAGAA GATACTGTAA AAGCTTTAAT GCATGTTCGT ATTGAGCAAA AGGTAGAACG TGAAGAGGTT GCTAAGGTAA CCGGTACAAA CCGTGATGAA TCTGTAGCTA AGGCACCTGT AAAGAGAGCG ACCAAGAAAG TTCAACCCAA TGATCCATGT CCATGTGGAA GTGGTAAGAA ATATAAGCAT TGCTGTGGCG GAGTTGGTAG AATCTAA
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Protein sequence | MGLIKKIFGT HSEREIKLIR PTADKIEALE PDMMKLSDDE LRGKTIEFKN RLKNGETLDD ILVEAYAVVR EAAKRTLGNR AYYVQLLGGI ILHQGRISEM RTGEGKTLTS TFPAYLNALE GEGVHIVTVN DYLAKRDAEW MGEVHRFLGL SVGCILNDMD NDERRKAYNC DITYATNNEL GFDYLRDNMV IYKEQLVMRD LHFAIIDEVD SVLIDEARTP LIISGQSGKS TRLYEACDIL ARQLTKGTAK ELSKMDIIMK EDDQETGDFV VNEKEKAVNL TAEGVEKVER FFKIENLADP ENLEIQHNII LALRAHYLMA IDKDYVVKDD EVLIVDDFTG RIMPGRRYSD GLHQAIEAKE HVKVKRESKT LATITFQNFF NKYTKKCGMT GTALTEENEF REIYGMDVVE VPTNRPVARI DKDDAVYRTK REKLNAVINA IVEAHKAGQP VLVGTITIEA SEEISELLKK KNIPHKVLNA KFHELEAEII ADAGQKGAVT IATNMAGRGT DIKLGEGVTE LGGLKIIGTE RHESRRIDNQ LRGRSGRQGD PGESCFYICL EDDLMRLFGS ERLNTIFKSL GLPEGEQIEH KMLSGAIEKA QKKIEDNNFG IRKNLLEYDK VNNEQREIIY AERRKVLNGD SMRDVIFKMI TDNVETCVNT SISDDQLPEE WDLAELNQML LPIIPMEPVE LKDNELRHMK RNELIHMLKE KAVKLYEEKE AEFPEKEHLR EVERVVLLRV IDRKWMDHID DMDQLRQGIG LQAYGQRDPK TEYKFSGFEM FDTMINAITE DTVKALMHVR IEQKVEREEV AKVTGTNRDE SVAKAPVKRA TKKVQPNDPC PCGSGKKYKH CCGGVGRI
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