Gene Cphy_0256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_0256 
Symbol 
ID5744179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp315431 
End bp318007 
Gene Length2577 bp 
Protein Length858 aa 
Translation table11 
GC content38% 
IMG OID641291346 
Productpreprotein translocase, SecA subunit 
Protein accessionYP_001557382 
Protein GI160878414 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) 
TIGRFAM ID[TIGR00963] preprotein translocase, SecA subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value9.54938e-05 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGATTAA TAAAGAAAAT ATTTGGAACA CATAGCGAAC GAGAGATAAA ACTTATCCGC 
CCTACTGCAG ATAAGATAGA GGCATTAGAA CCGGATATGA TGAAACTTTC GGATGATGAA
TTAAGAGGTA AAACTATAGA GTTTAAAAAT CGTTTGAAAA ATGGTGAGAC ATTAGACGAT
ATCTTAGTGG AAGCTTATGC AGTAGTTCGA GAAGCTGCGA AGAGAACTCT TGGTAATAGA
GCTTATTATG TTCAGCTATT AGGCGGTATC ATTCTTCATC AGGGAAGAAT CTCTGAGATG
AGAACTGGTG AAGGTAAGAC ACTTACATCT ACATTTCCAG CATATCTTAA TGCACTTGAA
GGAGAAGGCG TACACATCGT AACAGTAAAT GACTATCTTG CAAAGCGTGA CGCTGAGTGG
ATGGGTGAAG TTCATCGTTT CCTTGGTTTA AGTGTTGGAT GTATCTTAAA CGATATGGAT
AATGACGAAA GAAGAAAAGC ATATAACTGT GATATTACTT ATGCTACAAA CAATGAATTA
GGTTTTGATT ACTTAAGAGA TAACATGGTT ATTTATAAAG AACAGCTTGT TATGAGAGAT
TTGCATTTTG CTATCATCGA TGAGGTTGAC TCTGTATTAA TCGATGAGGC TAGAACTCCT
CTTATAATTT CAGGTCAAAG TGGAAAATCA ACTAGACTGT ATGAAGCATG TGATATCTTA
GCTCGCCAGT TAACTAAAGG TACTGCGAAA GAACTTTCTA AGATGGATAT CATCATGAAA
GAAGATGACC AAGAAACTGG TGATTTTGTT GTAAATGAGA AAGAGAAGGC TGTAAACCTT
ACCGCAGAGG GTGTAGAAAA AGTAGAGCGC TTCTTTAAGA TAGAAAACCT TGCAGATCCT
GAGAATCTTG AAATTCAACA TAATATTATC TTAGCATTAC GTGCTCATTA CTTAATGGCA
ATCGATAAAG ATTATGTAGT TAAGGATGAC GAAGTATTAA TCGTAGATGA CTTTACTGGA
CGTATTATGC CTGGTAGAAG ATATTCTGAC GGTTTACACC AAGCGATTGA AGCGAAGGAA
CATGTAAAGG TAAAGAGAGA AAGTAAGACT CTTGCGACAA TTACATTCCA GAACTTCTTC
AATAAATACA CGAAAAAATG TGGTATGACT GGTACTGCGT TAACCGAAGA AAACGAATTC
CGTGAAATCT ATGGCATGGA CGTTGTGGAA GTACCAACCA ATCGTCCTGT TGCCCGTATT
GATAAAGATG ACGCTGTTTA TCGTACTAAG AGAGAAAAAT TGAATGCAGT TATCAATGCA
ATCGTAGAAG CTCATAAGGC AGGACAGCCG GTGCTCGTTG GTACTATTAC AATCGAAGCA
TCCGAAGAAA TCAGTGAATT ATTAAAGAAA AAGAATATTC CTCATAAGGT ATTGAATGCG
AAGTTCCATG AACTAGAAGC GGAAATTATC GCAGACGCAG GTCAAAAAGG TGCTGTAACC
ATAGCAACCA ACATGGCTGG TCGTGGTACT GATATCAAGC TTGGAGAAGG TGTAACAGAA
CTAGGTGGTC TTAAGATAAT CGGTACAGAG CGTCATGAAT CCAGACGTAT TGATAACCAG
TTACGTGGTC GTTCCGGTCG TCAGGGTGAC CCAGGTGAAT CTTGTTTCTA CATCTGTTTG
GAAGATGATT TAATGCGTTT GTTTGGTTCA GAACGTTTAA ATACAATCTT TAAGTCACTT
GGTTTACCAG AAGGTGAGCA GATCGAGCAT AAGATGTTAA GCGGTGCTAT TGAGAAGGCA
CAAAAGAAGA TAGAGGATAA TAACTTTGGT ATCCGTAAGA ATCTTCTTGA GTACGATAAA
GTAAATAATG AGCAACGTGA GATTATCTAC GCTGAAAGAA GGAAAGTATT AAACGGCGAT
AGTATGAGAG ATGTTATCTT TAAGATGATT ACAGATAACG TAGAAACCTG CGTAAATACT
AGCATTAGCG ACGACCAGCT TCCAGAAGAA TGGGATTTAG CAGAATTAAA TCAGATGTTA
CTTCCGATTA TTCCAATGGA GCCTGTGGAG TTAAAAGATA ATGAATTAAG ACATATGAAG
AGAAATGAAT TAATTCATAT GTTAAAGGAA AAAGCAGTTA AGTTATACGA AGAGAAGGAA
GCAGAATTCC CAGAGAAAGA ACATTTAAGA GAAGTGGAAC GTGTTGTACT TCTTCGTGTG
ATTGACCGTA AATGGATGGA TCATATCGAT GATATGGATC AGTTACGTCA AGGTATTGGC
TTACAGGCAT ATGGTCAGAG AGATCCTAAG ACAGAATATA AGTTTAGCGG TTTTGAAATG
TTTGACACCA TGATTAATGC CATTACAGAA GATACTGTAA AAGCTTTAAT GCATGTTCGT
ATTGAGCAAA AGGTAGAACG TGAAGAGGTT GCTAAGGTAA CCGGTACAAA CCGTGATGAA
TCTGTAGCTA AGGCACCTGT AAAGAGAGCG ACCAAGAAAG TTCAACCCAA TGATCCATGT
CCATGTGGAA GTGGTAAGAA ATATAAGCAT TGCTGTGGCG GAGTTGGTAG AATCTAA
 
Protein sequence
MGLIKKIFGT HSEREIKLIR PTADKIEALE PDMMKLSDDE LRGKTIEFKN RLKNGETLDD 
ILVEAYAVVR EAAKRTLGNR AYYVQLLGGI ILHQGRISEM RTGEGKTLTS TFPAYLNALE
GEGVHIVTVN DYLAKRDAEW MGEVHRFLGL SVGCILNDMD NDERRKAYNC DITYATNNEL
GFDYLRDNMV IYKEQLVMRD LHFAIIDEVD SVLIDEARTP LIISGQSGKS TRLYEACDIL
ARQLTKGTAK ELSKMDIIMK EDDQETGDFV VNEKEKAVNL TAEGVEKVER FFKIENLADP
ENLEIQHNII LALRAHYLMA IDKDYVVKDD EVLIVDDFTG RIMPGRRYSD GLHQAIEAKE
HVKVKRESKT LATITFQNFF NKYTKKCGMT GTALTEENEF REIYGMDVVE VPTNRPVARI
DKDDAVYRTK REKLNAVINA IVEAHKAGQP VLVGTITIEA SEEISELLKK KNIPHKVLNA
KFHELEAEII ADAGQKGAVT IATNMAGRGT DIKLGEGVTE LGGLKIIGTE RHESRRIDNQ
LRGRSGRQGD PGESCFYICL EDDLMRLFGS ERLNTIFKSL GLPEGEQIEH KMLSGAIEKA
QKKIEDNNFG IRKNLLEYDK VNNEQREIIY AERRKVLNGD SMRDVIFKMI TDNVETCVNT
SISDDQLPEE WDLAELNQML LPIIPMEPVE LKDNELRHMK RNELIHMLKE KAVKLYEEKE
AEFPEKEHLR EVERVVLLRV IDRKWMDHID DMDQLRQGIG LQAYGQRDPK TEYKFSGFEM
FDTMINAITE DTVKALMHVR IEQKVEREEV AKVTGTNRDE SVAKAPVKRA TKKVQPNDPC
PCGSGKKYKH CCGGVGRI