| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0246 |
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| Symbol | |
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| ID | 5745114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 304326 |
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| End bp | 306554 |
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| Gene Length | 2229 bp |
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| Protein Length | 742 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 641291336 |
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| Product | RecD/TraA family helicase |
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| Protein accession | YP_001557372 |
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| Protein GI | 160878404 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR01448] helicase, putative, RecD/TraA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGAAG AGTTAAAAGG ATATGTAGAG AGAATTGTAT ATCGAAATGC TGAAAATGGT
TATACTGTAC TAAGTCTCTC CGCAGAGGAA GATGAAGTGA CCTGCGTTGG CACATTTTCT
TTTGTGAATG AAGGAGAATA TCTTTCTTTA ACCGGTAGCT ATACTGCACA TCCATTGTAT
GGTGAGCAAT TTCAGGTGAG CTCCTATGAG ATGAAGGAGC CAGAGGACTT ACTATCGATC
GAACGTTACT TAGGGTCCGG TGCAATCAAA GGAGTAGGAA CCGCATTAGC CGCACGTATT
GTTCGTAAAT TTAAAGAAAA AACATTTGTG ATTATTGAAG AAGAACCGGA ACGTCTTTCT
GAAGTGAAGG GGATCAGTGA TAAGTTAGCA AGAGAGATTT ACAGGCAGTT TTCCGAAAAG
AGAGAGATGA GAAGTGCTAT GCTATTTCTT CAACAATATG GCATCTCCTT AAATCTTGCA
GTAAAAATCT ATAAGCAGTA TGGAGAGCGT ATGTATGAGG TTATAAAAGA GAATCCATAT
CGCTTGGCAG AAGATATTAG TGGAGTAGGT TTTAAGATTG CAGATGAAAT CGCCTCTAGG
ATAGGAATTC GAACTGACTC AGACTATCGC GTAAAAGCAG GTATCCTTTA TAACTTATTG
CTTGCAAGCG GTAACGGACA TGTATATCTT CCAATGCATA GTTTGGTAGG TAAAACCTGT
GAGATGCTTA TGGTGGAAGC AGATACGGTT AAGAGGCACA TTACCTCTCT CGCTCTTGAA
AAAAAGCTGG TAGTAAAAGA ATCAGGGGAA GAACAGCATG TTTATAGTAC ATCTTTTTAC
TATATGGAGT TAAATGTTGC GAATATGCTT TCTGATCTTA GTATATCCTA TGATATCTCC
CCAGCTCAAG TTGAAACGAG ACTTGCAAAA ATTGAACAGG AAACAAATCT GGAGCTAGAT
GAAATGCAAC GCTATGCTGT GATGGAGGCT GTCCGCAGCG GGTTATTAAT TATAACCGGT
GGTCCTGGTA CTGGTAAAAC TACAACCATT AATACAATAC TTCGCTTTTT TGAAGCAGAA
GGGATGGATA TGCTTCTAGC AGCGCCTACT GGACGAGCTG CAAAGCGTAT GAAAGAAACG
ACTGGTTATG AAGCAAGTAC GATCCATCGT TTATTGGAGC TTACGAAGGG AATGGACGAT
AAGGATGGTA GGATGAGCTT TGAACGTAAC GAGCTAAATC CTCTTGAGGC GGATGTGATT
ATCATCGATG AGATGTCGAT GGTTGACATC TCGTTAATGC ATTCTTTATT AAAAGCGATT
ACGGTTGGCA CCAGAATAAT CTTAGTTGGT GACGTTAACC AGTTACCTAG CGTTGGACCG
GGTAATGTAC TGCGAGATAT GATTGAATCG AAGGCATTTC CAGTTGTTAT GCTAAAAAAG
ATTTTTAGGC AGGCATCCGA AAGTGATATT ATCGTAAATG CTCATAAGAT CAATTCCGGA
GAACATATTA CCTTGGATAA TAAGAGTAAG GATTTCTTTT TGCTAAAAAG AGATGATGTT
AATGTAATTA TTAGCGTAAT TATCTCTCTA GTTCGCGATA AGATGCCCAA GTACGTGAAT
GCTTCTGTTT ACGATATTCA AGTACTTACG CCGATGCGAA AAGGAGAACT TGGTGTAGAA
AGATTGAATC AAGTATTACA ACAGTATCTA AACCCTTCCT CCCAGGAGAA AAAGGAAAAG
GAACATTTCG GTGGAATCTT TCGTGAGGGT GATAAGGTTA TGCAGGTGAA GAACAATTAT
CAAATCGCCT GGGAGACCAA AAGCCGTTAT GGTATTACAA TTGATAGTGG GACTGGTGTA
TTTAACGGCG ATACAGGAGT AATTAAAGAA ATTAATCTTT TTGCAGAGGA GTTAACGGTA
GAGTTTGATG AAGGACGTCT GGTTACCTAT CCATTTAGTC AATTAGAGGA ATTAGAACTG
GCTTATGCAG TGACGATTCA CAAATCACAG GGTAGTGAAT ACCCAGCGGT TGTTCTACCT
ATATACAGTG GGCCAAGGAT GTTATTTAAC CGAAACCTTT TATATACAGC GGTTACAAGA
GCAAAGCAAT GCGTTACTAT CGTTGGTAGT GATAATATGG TGCAGTCAAT GATTGATAAC
GAAAGTGAGT TAAAGCGTTA TTCGGGTTTA CAGTCTAGAA TTATGGAAAG GAAGCAAATA
TTAAGCTAG
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| Protein sequence | MAEELKGYVE RIVYRNAENG YTVLSLSAEE DEVTCVGTFS FVNEGEYLSL TGSYTAHPLY
GEQFQVSSYE MKEPEDLLSI ERYLGSGAIK GVGTALAARI VRKFKEKTFV IIEEEPERLS
EVKGISDKLA REIYRQFSEK REMRSAMLFL QQYGISLNLA VKIYKQYGER MYEVIKENPY
RLAEDISGVG FKIADEIASR IGIRTDSDYR VKAGILYNLL LASGNGHVYL PMHSLVGKTC
EMLMVEADTV KRHITSLALE KKLVVKESGE EQHVYSTSFY YMELNVANML SDLSISYDIS
PAQVETRLAK IEQETNLELD EMQRYAVMEA VRSGLLIITG GPGTGKTTTI NTILRFFEAE
GMDMLLAAPT GRAAKRMKET TGYEASTIHR LLELTKGMDD KDGRMSFERN ELNPLEADVI
IIDEMSMVDI SLMHSLLKAI TVGTRIILVG DVNQLPSVGP GNVLRDMIES KAFPVVMLKK
IFRQASESDI IVNAHKINSG EHITLDNKSK DFFLLKRDDV NVIISVIISL VRDKMPKYVN
ASVYDIQVLT PMRKGELGVE RLNQVLQQYL NPSSQEKKEK EHFGGIFREG DKVMQVKNNY
QIAWETKSRY GITIDSGTGV FNGDTGVIKE INLFAEELTV EFDEGRLVTY PFSQLEELEL
AYAVTIHKSQ GSEYPAVVLP IYSGPRMLFN RNLLYTAVTR AKQCVTIVGS DNMVQSMIDN
ESELKRYSGL QSRIMERKQI LS
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