Gene Cphy_0195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_0195 
Symbol 
ID5745063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp242919 
End bp244052 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content42% 
IMG OID641291285 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001557321 
Protein GI160878353 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAAAA AGCTATCCAT TCGTGCTCGT CTTACTGCTC TTAGTATCTT AGCACTTACC 
ACCTGCTGTA TTGGCTTAAC TACTATTTTA AACCTCTCTG CATATCACAT GGCAGATGTA
ATCGAAGCTA TTCCAATCAC GCCGGCATAC GAGGTTTCTA AGGATGCAAC TGCTATAGAA
CAAGCCCCCT TGCTTAGTAG GACAACAACC ACACCGTCAG AAGGCTCCCA AATAGCGCGA
ACTCGTTTCT TATATCAAAG CATTATATAT ATGGTGTTGA TCGTGACCAT AGGCGGTGGA
CTTACCTACT ATATTACAGG GAAAGCCTTA ATGCCGTTAC GGGTGTTGAG TCACCAGATG
AAAAATCGTA CGGTGCACAA TCTGTCTGAG GATTTACCGG TGCCAGAAAT TCACGATGAG
ATTGCAGATC TGACGGTTTC CTTTAACCAA ATGTCCAGCA AATTAGAAGA AGCCTTTGCC
ATGCAAAAAC GTTTTTCCCA AAGTGCCGCC CATGAGCTAC GTACGCCGCT TACAGTGCTA
AGAACAAAGG TGGATGTGTT TAAAAAGAAA AAAGAACATA CATCCGAAGA ATATGATAAT
TTACTATCGG TCATCACCAC TCATACAAAC CGACTGTCAG AGCTAGTGAA GGATTTATTA
GACCTGACCA ATATGGACGA TCTAGACTAT GATGAACAAA TCGAACTAAA CGCATTGCTC
CAAGATGTTG TGGAGGAGTT GATTCCTCTT ACGAAAGAAA AAAATATTAC GATTAATGTA
AATGGCACAT CAAAAAGCAT AGCTGGAAAC AAAAGTCTGC TGCACAGAGC CTTTTACAAT
CTAGTCGAAA ACGCCATCAA ATATAATACC GAAAACGGAA CAGTTGACAT TTGCATTGGG
GATTCGGCAG ACCATGCTGT TGTAACGATT GCGGACACAG GTATCGGAAT ACCGAAGGAG
CTAGAAGAGT TAATTTTTGA ACCCTTCTTT CGTGTGGATA AATCTCGTTC AAGACAAATA
GGTGGCGCAG GTTTAGGACT GTCAACCGTG AAAACAATAA TAGAAAAGCA TAACGGGGTC
GTGTCCGTTT CCGAAAATGA AACAGCGGGC AGTCGATTCA CCATACAATT ATAA
 
Protein sequence
MIKKLSIRAR LTALSILALT TCCIGLTTIL NLSAYHMADV IEAIPITPAY EVSKDATAIE 
QAPLLSRTTT TPSEGSQIAR TRFLYQSIIY MVLIVTIGGG LTYYITGKAL MPLRVLSHQM
KNRTVHNLSE DLPVPEIHDE IADLTVSFNQ MSSKLEEAFA MQKRFSQSAA HELRTPLTVL
RTKVDVFKKK KEHTSEEYDN LLSVITTHTN RLSELVKDLL DLTNMDDLDY DEQIELNALL
QDVVEELIPL TKEKNITINV NGTSKSIAGN KSLLHRAFYN LVENAIKYNT ENGTVDICIG
DSADHAVVTI ADTGIGIPKE LEELIFEPFF RVDKSRSRQI GGAGLGLSTV KTIIEKHNGV
VSVSENETAG SRFTIQL