Gene Cphy_0192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_0192 
Symbol 
ID5745060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp238298 
End bp240091 
Gene Length1794 bp 
Protein Length597 aa 
Translation table11 
GC content42% 
IMG OID641291282 
ProductABC transporter related 
Protein accessionYP_001557318 
Protein GI160878350 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000020543 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTACAAG TAAATCATGT GACAAAAAAA TATGGAAATG CCATTATATT AGAAAACAGT 
AGCTATACCT TTCCTTCCAA AGGTATCGTG TGCCTAATGG GTGCGTCTGG TGGTGGTAAA
ACCACCCTGC TTAACCTTCT TGCTGGATTC GATACTGATT ACGAAGGAGA AATCCTGGTA
GGAGGCACAT TAATTAGCGG AATGGACGCT GAAAAGCTCT GTCAGTATCG CCGGGATAAC
ATCGGCTTTG TGTTCCAAAA TTATCACCTG CTTCCAGGTT ATACCGCATC GGAAAATGTG
CTACTTGCAT CCGCACTGTC GAAAGATTCT CCAGATGCTA GCCGACAAAA AGCCGCAACA
CTTTTAACGC GACTAGGAAT TGGAGAAAAG GAAAATCAAA AAGTGGAAAA CCTCTCTGGC
GGGCAAAAGC AACGTGTTGC GATCGCCAGG GCCTTGATGA GTGACCCGCA AATCATATTC
GCTGATGAGC CTACCGGTGC TCTTGACCGC ACGACCTCAA CAGAAATTAT GAAGCTGCTG
CAAGAAATAT CTAGGGACAG ACTTGTTGTG GTAATTACTC ACGATGCAAA AATTTGCGAA
TTTGCCGATG AGATCATTCA CATTAAGGAG AAAAAAATCA TAGAGGAGCG GGTAATAAGA
CGCGATGTGA CAGACGAAAA AGCGTTGGTA GTCGGTTCGT CGCCTAAGAT TTCTATATTC
TCTCGCGCTG TGAAAAACTT TAAGGTGCAC TTAACGCGTT ATGCTGCGGT ATCTCTCTCT
ATCTCCATTG GCTTACTTGC CTTCCTGTTT TCTCTATCCT TTGGCAATGT GATGGAACGC
TCTATCGACG ACTTTAAGAC CAAGAACACC GCCTTTAATA ATGGCTATAT CAAGGGTGCG
GACGATGGTA CAATACTCGA ATATCTTAAG AAGGACGAAC GCATCGAAAA CGTGTATTAT
CAGTATAAGC TTCGTAATCT CACTTTATCG ACAGGTGATA AATCAGAGCA GATAGCGGAG
AAGTTTCCGA CGCCAAAAGC GACCGAGAGC TTATCTTATG GTGTGATGCC TCGTCTCGGA
CAAAATGAGA TTGCAATCAC ACCAAGCCTT GCTAAGAAAT TTGATTCAGA CATTAAGAAA
CTTCTAGGAA AAGAGTTTAT ATTAGAACTG GATGGACAAA AACATAAGCT TACTATGAGT
GGAATCTATA ACGCTGGCTA TGATGATTTT ATTGTCAGCT CTGATATTGA GCAACAATTT
TATAAAAATA TTACGGATGA AAAAAACTAT TCTATTAGCT ATGATGTCAA GGAATTTTCC
GATATCGTAG GGGTTAGCAA CGTCCTAAAG TTACGGGGAA TCACTGCCAA AACGGCCTCT
GACGAGGTGT ACGCGCTACA AAACACGTTT CACAGTCTTA ATAAATTATT TCTTGTGATT
TCCTTTTTGA TTTTGGCAAT TAGTTTGTTC ATCTGCACTA TTTTGCTGAA CAAGCTACAA
AACACTCGTT ATCACGAAAT AGGACTGTTG TCAGCTCTTG GGTTTAGCAG ACAGCAAATC
AGCTCGATGA TTCGATGTGA AAATTTGTTG CTGTCCTCCC TCGCCACAGT AGTAAACCTC
ATTCTCCTTT TCGCCAGCAT ATTACTTGGT AAACTGCTTG ATTTCGCGCT GATTTTTACA
GGAGCGCAGG TCGTTTTATC CATAGTGGCT ACCTTTGCCA TTGTTATGCT TCTAAGTGCT
GTAGCGAGCT ATAAGTTAAT ACGTACCGAG CCAGCGATAG CACTGAAAAA GTGA
 
Protein sequence
MLQVNHVTKK YGNAIILENS SYTFPSKGIV CLMGASGGGK TTLLNLLAGF DTDYEGEILV 
GGTLISGMDA EKLCQYRRDN IGFVFQNYHL LPGYTASENV LLASALSKDS PDASRQKAAT
LLTRLGIGEK ENQKVENLSG GQKQRVAIAR ALMSDPQIIF ADEPTGALDR TTSTEIMKLL
QEISRDRLVV VITHDAKICE FADEIIHIKE KKIIEERVIR RDVTDEKALV VGSSPKISIF
SRAVKNFKVH LTRYAAVSLS ISIGLLAFLF SLSFGNVMER SIDDFKTKNT AFNNGYIKGA
DDGTILEYLK KDERIENVYY QYKLRNLTLS TGDKSEQIAE KFPTPKATES LSYGVMPRLG
QNEIAITPSL AKKFDSDIKK LLGKEFILEL DGQKHKLTMS GIYNAGYDDF IVSSDIEQQF
YKNITDEKNY SISYDVKEFS DIVGVSNVLK LRGITAKTAS DEVYALQNTF HSLNKLFLVI
SFLILAISLF ICTILLNKLQ NTRYHEIGLL SALGFSRQQI SSMIRCENLL LSSLATVVNL
ILLFASILLG KLLDFALIFT GAQVVLSIVA TFAIVMLLSA VASYKLIRTE PAIALKK