| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0127 |
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| Symbol | |
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| ID | 5744277 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 170160 |
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| End bp | 170705 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 641291215 |
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| Product | AbrB family transcriptional regulator |
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| Protein accession | YP_001557255 |
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| Protein GI | 160878287 |
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| COG category | [K] Transcription |
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| COG ID | [COG2002] Regulators of stationary/sporulation gene expression |
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| TIGRFAM ID | [TIGR01439] looped-hinge helix DNA binding domain, AbrB family
[TIGR02851] stage V sporulation protein T |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000412675 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGCAA CAGGTATCGT ACGACGCATA GATGACTTAG GAAGAGTGGT TATCCCAAAG
GAAATTAGAA GAACTTTACG TATTCGTGAA GGGGATCCAT TAGAAATTTT TACAGACCGT
GAAGGAGAAA TTATTTTAAA GAAATACTCT CCTATCGGTG AGTTAGGACA GTTTGCAAAA
CAATATGCGG ATTCTATCGG TCATACGACT GGTCATATTG TTGCTATTAC CGATAAGGAT
CAGTTTATAG CAATTGCTGG TTCCGCTAAA AAGGATTGGG TTACAAAACC AATCAGTAAA
GAACTTGAGG CATTAATTAA TGACCGTGAA ACGGTAACTG CAGCGAAAGA AGAAAAAGGA
TTTATCCGTG TTTGCTCTGA TGATGAAGAT ATTGCCTATG AAGTTATTTC ACCGATTATT
TGTGAAGGTG ATGCTATCGG AGCAGTATTA ATTCTTACAA GAGATGTAAA AACTAAGCTT
GGCGAAGTTG AGAATAAACT TGCTGCTACT GCAGCTGCAT TCCTTGGAAG ACAAATGGAG
AACTAA
|
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| Protein sequence | MKATGIVRRI DDLGRVVIPK EIRRTLRIRE GDPLEIFTDR EGEIILKKYS PIGELGQFAK
QYADSIGHTT GHIVAITDKD QFIAIAGSAK KDWVTKPISK ELEALINDRE TVTAAKEEKG
FIRVCSDDED IAYEVISPII CEGDAIGAVL ILTRDVKTKL GEVENKLAAT AAAFLGRQME
N
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