| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0094 |
|---|
| Symbol | |
|---|
| ID | 5745021 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | - |
|---|
| Start bp | 124837 |
|---|
| End bp | 125703 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 641291183 |
|---|
| Product | DegV family protein |
|---|
| Protein accession | YP_001557223 |
|---|
| Protein GI | 160878255 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1307] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR00762] EDD domain protein, DegV family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCCAA CGCATAGAAA GGAACTCATG ATTAGAATAA TTTCAGACAC ATCTACTCTA
TACTCCGTAA GTGAGGCAGA AGAAAAAGGA ATCTATGTTT CTCCTTTAGC AGTAACTATT
AATGATACTA CCTACGAAGA GTTTAATGAC ATACAAACGG AGGAATTTGT TGACTTAATA
CATCAAGGCC ATATCCCTCT ATCCTCACAG CCTGCAATAG GCAGAGTCGT AGACCTATAT
AATCGATTTC CAGAAGATGA GATTCTAAAC ATCACAATGG CAGATGGATT ATCAGGTACT
TATCAATCCG CTATACTAGC GAAAGACATG GCCAAGGACA GCGAACGAAT CACTGTTCTA
AATTCAAAGA CACTGTGTGG CCCACACAGA ACGCTTGTTG AGCATGCAAA ACATCTAGCT
GATCAAAATC ACACGATATC AGAAATCGTA TCTAAATTAG AAAAGATGAT AGCAAGTTCC
CGTTCTTTCC TAATACCACA AGACTTCGAT TATCTACGGA GAGGTGGTAG ATTAAGTCAC
CTTGCAGCTT TCGTTGGCAA AACAATTCAT CTTGTCCCTG TTATGACTTT AACAAAGGAT
TGCAAGCAAC TTTGTAATTT TTCAATAAAG CGTAATTTTA AAAAAGCTAT TCATGAAATT
ATTCGAAGTC TAGAAGACGA TAACATAGGA GAACATCATA AGCTTTATGT TTCTCACTCT
CTTGCGGAGT CGCTTGCTAT AACAGCGAGT GAATTATTAA AGGAAGCTTT CCCTCATTCT
GACGTAATAA TATATAAATT AAGCCCAGCT TTTACTACGC AGGGTGGACC TGGATGCATT
GCAATTCAAT CACTTAGCAT GGAATAA
|
|---|
| Protein sequence | MNPTHRKELM IRIISDTSTL YSVSEAEEKG IYVSPLAVTI NDTTYEEFND IQTEEFVDLI
HQGHIPLSSQ PAIGRVVDLY NRFPEDEILN ITMADGLSGT YQSAILAKDM AKDSERITVL
NSKTLCGPHR TLVEHAKHLA DQNHTISEIV SKLEKMIASS RSFLIPQDFD YLRRGGRLSH
LAAFVGKTIH LVPVMTLTKD CKQLCNFSIK RNFKKAIHEI IRSLEDDNIG EHHKLYVSHS
LAESLAITAS ELLKEAFPHS DVIIYKLSPA FTTQGGPGCI AIQSLSME
|
|---|
| |