| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0080 |
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| Symbol | |
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| ID | 5745007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 109893 |
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| End bp | 110531 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 641291169 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001557209 |
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| Protein GI | 160878241 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACCTA TCAAGGTAAT TATTGCGGAT GATAGTGATT TTGTAAGAGA TGGCATGCGC
ATTATATTAA GTGTTGACCC TGACTTTGAG GTAGTCGGAT GTGCGAAAAA TGGAAAGGAA
GCAGTAGAAC TAGCTTCTAA AAGTTCTGTG GATGTTATCT TAATGGATAT CGAGATGCCG
GTGATGAACG GCATTGAAGC AACAAAAGAA ATCGTACTTC ATAATCTTGG GAAGGTACTC
ATATTGACTA CATTTGATGA TGATGAATTA GTGGAGCAGT CGATTCAAAA TGGAGCAAAA
GGCTATTTAA TCAAGAATCA CACCCCGGAG AAGTTAAAGC AAATGATTAA ATCAATCTAT
AATGGGGTCA ATGTTCTGGA TGAAAAAGTG TTTGAAAAGT TTACTTCCCG CAGCATTCAT
ACAAATACGG GTTTTGATCC AAATGGGTAT ACAACAAGAG AACTTGACAT CATCGCTTCG
GTGGCGGAGG GGCTATCAAA CAAAGAAATT GCTAAGAAGC TATTTATTAG CGAGGGAACG
GTTAAGAATC ACATTAGTAC CATTTTAGAA AAGGGAGGCT TCTCTCATCG AACTCAACTT
GCTGTTTATT ATTTGACCGG GAAAAAACAA GGCGAGTGA
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| Protein sequence | MEPIKVIIAD DSDFVRDGMR IILSVDPDFE VVGCAKNGKE AVELASKSSV DVILMDIEMP
VMNGIEATKE IVLHNLGKVL ILTTFDDDEL VEQSIQNGAK GYLIKNHTPE KLKQMIKSIY
NGVNVLDEKV FEKFTSRSIH TNTGFDPNGY TTRELDIIAS VAEGLSNKEI AKKLFISEGT
VKNHISTILE KGGFSHRTQL AVYYLTGKKQ GE
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