Gene Cphy_0052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_0052 
Symbol 
ID5744972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp70537 
End bp71733 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content34% 
IMG OID641291134 
Producthypothetical protein 
Protein accessionYP_001557181 
Protein GI160878213 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0289016 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGAGAT TAAAAAGAAG CCTTAGGGCT GATGAATTGA ATTTAAAAAA GAAAAAAAAG 
CGTAGACTGA TCCTTTCCCT TGGTGTCATA GGAATCTTAA TAATTCTAGG GATAGCTATT
GTTTTACATA GAAAAACCGC GGTATACACC TCTTATAAGG TAGTCGGATC GACAGAACTA
ACGAATGCAA AAGAAAGTAG CTACCTAAAA TATAAAAATG GAGTTATAAA GTATAATAGA
GATGGTGCAG AGGCAATAGG TGCAGATGGA ACAGTACTAT GGAACGTTTC TTATAGTATG
AAGAAGCCAA TAATTAATGT AAGGGGTAGT TATGCAGCTA TTGCTGATAT GGGAAGTTAT
GACCTCGTTA TTGTAAATGG TTCAGGAACA ACAAATGCGC TCACTATGAA AGAGCCAATT
GCAGCGGTTA AAATAGCGTC TCAAGGTGTA ACAGCAGTGT TAACTGGAAA TGGGACTACA
GATTATATCT ATTTTTATGA TATGAATAGC GAGAATGGAA AGTCAATATT AGATGTAAAA
ACCATGGTTA CAACGGACGG TTTTCCAACC GATATTGGTA TCTCAGAGGA TGGTACAAAA
TTGGTAACCT CCTATTTGGC TGTGGATGAT GATAATGATG GTGTAGTTAG TAAAGTTACT
TTTTATAACT TTGGTGAATA TGGTAAGAAT CAAGTTGATA ACCTGGTAGG ATTTTATTCA
GACTATCGAG GAGAGGTAAT ACCGAAAGTT GAGTTTTTAA ATAATGAAAT CGTGGCCGCG
TTTCGGGATA CTGGAATCAC GTTATATTCC ATAAAAGAAG TTCCGCGCGA AATCATGCGA
CAAACCTATA CAGAGAAAAT ACATAGTATT TGCTATAATG ATATGTATGT AGGGGTGATT
CTTGATGGTA CAAATAATAC ACAGGAAAGA AAAGTATTAC TTTACGATTT TTCAGGGAAA
AAGATATTAG AAAAAGAAGT GAACTTTACC TTCCAAAACG TAACTTTAAT AGAGAATCAA
ATCATTTTCT ACAGTAGTAC GGAATGTAAT ATTATGAATA TTGATGGCAG TATGAAGTTT
TCTTCGCAGT TCCATACGAA TGTAACAAGT CTATATCAAA CAAGTAGTAT GAATGAATAT
CTTTTAGTTA CAGATGTGGG ACTAGATAAA ATTCAATTAA ATAAGTCGGA GGAGTAA
 
Protein sequence
MERLKRSLRA DELNLKKKKK RRLILSLGVI GILIILGIAI VLHRKTAVYT SYKVVGSTEL 
TNAKESSYLK YKNGVIKYNR DGAEAIGADG TVLWNVSYSM KKPIINVRGS YAAIADMGSY
DLVIVNGSGT TNALTMKEPI AAVKIASQGV TAVLTGNGTT DYIYFYDMNS ENGKSILDVK
TMVTTDGFPT DIGISEDGTK LVTSYLAVDD DNDGVVSKVT FYNFGEYGKN QVDNLVGFYS
DYRGEVIPKV EFLNNEIVAA FRDTGITLYS IKEVPREIMR QTYTEKIHSI CYNDMYVGVI
LDGTNNTQER KVLLYDFSGK KILEKEVNFT FQNVTLIENQ IIFYSSTECN IMNIDGSMKF
SSQFHTNVTS LYQTSSMNEY LLVTDVGLDK IQLNKSEE