Gene Cphy_0018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_0018 
Symbol 
ID5744938 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp30987 
End bp32732 
Gene Length1746 bp 
Protein Length581 aa 
Translation table11 
GC content36% 
IMG OID641291101 
ProductABC transporter related 
Protein accessionYP_001557148 
Protein GI160878180 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATCT CACACTATTT AAAAAAGTAC TGGTATCGTT ATGCCTTTGC TATCTTTTGC 
ATTTTCGTAA CCGTCGGCTT AGATATGCTA AATCCACAGG TTACAATGCG TATTATTGAT
AATGTTATTG GAGAAGGGCA ACGAGACCAA CTAGCTCCAC TACTTGTTGT TGTTTTACTT
ATTGGCGTAG GTCGTTGTAT CTTTGGATAT TTAAAAGAAT ATAACTTTGA TTCTGTCAGT
TCCAAAATAT CTGCTGATCT AAGAAGCAAA CTATTTCGCC ATATACAAAC ACTGTCAGTA
GATTTTTTTG ATAAAAATAA CACTGGTGAA CTTATGTCCC GTGTAAAAGA CGATGTTGAT
CGTATCTGGG ACGCCTTTAA CTACGTAAGT ATGTTGTTAA TAGAGGTAGT CATTCATACC
AGTATCATCT TATATTGCAT GTTCCACCTA AATAAAAAAT TGTTTCTTGT TCCAGTAATA
GCAATGCCGT TAGTAGCAAT CTTAGCAGTT CTTTTGGAAA GAAAACTTGG TGGAATATAT
GAAGAAATCA GTGAGCAAAA TGCAACACTT AATACGATCG CACAAGAAAA TCTTGCAGGT
GTTCGAACAG TAAAAGCATT TGCTCGTGAA AAATTTGAAA TTCAAAAGTT CTTATCACAT
AACAAACGTT ATTATGATTT GAACATGAGC CAATCCAAAG TACTCACTCG TTATCAGCCA
TTATTTCAGC TGATTACTAG AGCGCTTCCA TTAATCATTG TTATCTATGG TGGCTACTTA
ACCATTCAAG GTGAAATTAC TCTTGGTGTA CTTGCCGCTT TTGTTGAGTA TAGCAATAAT
ATTACCTGGC CAATGGAGAT GATAGGCTGG CTGACAAACG CTGCTGCCTC TGCTGTAGCT
TCGAATAAGA AGATTAAGAA GATTTTTGCA GAAAATCCTA GCATTCAAAA TCCAGAAAAA
CCTGTCATTC TTGATGAGAT TACTGGTAAT ATCGAATTTC GTAATGTAGA TTTTGAAATA
GATGGGAAAG AAATTCTTCA TAATATCAAT TTTCATTTGC CTGCTGGAAA AACGATTGGT
ATTATGGGCG CGACTGGCGC TGGTAAGACA TCAATTATTA ATGTGCTTCA AAGGTTTTAT
GATGTAAAAG AAGGAGAAGT ACTTTTAGAT GGAGTAAATA TCAAAGAATT AAATCTTACC
CAACTAAGAA AAAGCGTTTC TTTGGTTATG CAAGACGTAT TCTTATTCTC TGATACCATT
AATGAGAACG TTAAGCTTGG TAAGAAGACA TCCATTGAAG ATGATGAAGT CATTCATGCA
CTGAAACATG CACAGGCCTC TGATTTTATC GAACAGATGG AAGAACAATA CGATACCATC
ATTGGAGAAC GTGGCGTCGG TCTATCGGGC GGTCAAAAGC AGCGTATCAG CATCGGTAGA
GCTATTGCAA AAAAGGCTCC AATCTTAGTT CTTGACGATT CTACTTCTGC TCTCGATATG
GAAACAGAAC ATCAGATACA AGAAACTTTA AATTCCTTAA ATGGAACGAC TAAGATCATC
ATCGCTCATA GAATCAGTGC TGTTCGTAAT GCAGATGAGA TCATTTTCTT AGAAAATGGA
ACCATTGCAG AACGAGGAAC TCATAATGAC CTTTTAAAGA AAGAAGGACT CTATTATGAG
ACCTATATGG CACAGTATGG TGATTATTTA GAAACCTCCA AAGAGGTAAT TGCATGTAAC
TATTAA
 
Protein sequence
MKISHYLKKY WYRYAFAIFC IFVTVGLDML NPQVTMRIID NVIGEGQRDQ LAPLLVVVLL 
IGVGRCIFGY LKEYNFDSVS SKISADLRSK LFRHIQTLSV DFFDKNNTGE LMSRVKDDVD
RIWDAFNYVS MLLIEVVIHT SIILYCMFHL NKKLFLVPVI AMPLVAILAV LLERKLGGIY
EEISEQNATL NTIAQENLAG VRTVKAFARE KFEIQKFLSH NKRYYDLNMS QSKVLTRYQP
LFQLITRALP LIIVIYGGYL TIQGEITLGV LAAFVEYSNN ITWPMEMIGW LTNAAASAVA
SNKKIKKIFA ENPSIQNPEK PVILDEITGN IEFRNVDFEI DGKEILHNIN FHLPAGKTIG
IMGATGAGKT SIINVLQRFY DVKEGEVLLD GVNIKELNLT QLRKSVSLVM QDVFLFSDTI
NENVKLGKKT SIEDDEVIHA LKHAQASDFI EQMEEQYDTI IGERGVGLSG GQKQRISIGR
AIAKKAPILV LDDSTSALDM ETEHQIQETL NSLNGTTKII IAHRISAVRN ADEIIFLENG
TIAERGTHND LLKKEGLYYE TYMAQYGDYL ETSKEVIACN Y