Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_0018 |
Symbol | |
ID | 5744938 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 30987 |
End bp | 32732 |
Gene Length | 1746 bp |
Protein Length | 581 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 641291101 |
Product | ABC transporter related |
Protein accession | YP_001557148 |
Protein GI | 160878180 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATCT CACACTATTT AAAAAAGTAC TGGTATCGTT ATGCCTTTGC TATCTTTTGC ATTTTCGTAA CCGTCGGCTT AGATATGCTA AATCCACAGG TTACAATGCG TATTATTGAT AATGTTATTG GAGAAGGGCA ACGAGACCAA CTAGCTCCAC TACTTGTTGT TGTTTTACTT ATTGGCGTAG GTCGTTGTAT CTTTGGATAT TTAAAAGAAT ATAACTTTGA TTCTGTCAGT TCCAAAATAT CTGCTGATCT AAGAAGCAAA CTATTTCGCC ATATACAAAC ACTGTCAGTA GATTTTTTTG ATAAAAATAA CACTGGTGAA CTTATGTCCC GTGTAAAAGA CGATGTTGAT CGTATCTGGG ACGCCTTTAA CTACGTAAGT ATGTTGTTAA TAGAGGTAGT CATTCATACC AGTATCATCT TATATTGCAT GTTCCACCTA AATAAAAAAT TGTTTCTTGT TCCAGTAATA GCAATGCCGT TAGTAGCAAT CTTAGCAGTT CTTTTGGAAA GAAAACTTGG TGGAATATAT GAAGAAATCA GTGAGCAAAA TGCAACACTT AATACGATCG CACAAGAAAA TCTTGCAGGT GTTCGAACAG TAAAAGCATT TGCTCGTGAA AAATTTGAAA TTCAAAAGTT CTTATCACAT AACAAACGTT ATTATGATTT GAACATGAGC CAATCCAAAG TACTCACTCG TTATCAGCCA TTATTTCAGC TGATTACTAG AGCGCTTCCA TTAATCATTG TTATCTATGG TGGCTACTTA ACCATTCAAG GTGAAATTAC TCTTGGTGTA CTTGCCGCTT TTGTTGAGTA TAGCAATAAT ATTACCTGGC CAATGGAGAT GATAGGCTGG CTGACAAACG CTGCTGCCTC TGCTGTAGCT TCGAATAAGA AGATTAAGAA GATTTTTGCA GAAAATCCTA GCATTCAAAA TCCAGAAAAA CCTGTCATTC TTGATGAGAT TACTGGTAAT ATCGAATTTC GTAATGTAGA TTTTGAAATA GATGGGAAAG AAATTCTTCA TAATATCAAT TTTCATTTGC CTGCTGGAAA AACGATTGGT ATTATGGGCG CGACTGGCGC TGGTAAGACA TCAATTATTA ATGTGCTTCA AAGGTTTTAT GATGTAAAAG AAGGAGAAGT ACTTTTAGAT GGAGTAAATA TCAAAGAATT AAATCTTACC CAACTAAGAA AAAGCGTTTC TTTGGTTATG CAAGACGTAT TCTTATTCTC TGATACCATT AATGAGAACG TTAAGCTTGG TAAGAAGACA TCCATTGAAG ATGATGAAGT CATTCATGCA CTGAAACATG CACAGGCCTC TGATTTTATC GAACAGATGG AAGAACAATA CGATACCATC ATTGGAGAAC GTGGCGTCGG TCTATCGGGC GGTCAAAAGC AGCGTATCAG CATCGGTAGA GCTATTGCAA AAAAGGCTCC AATCTTAGTT CTTGACGATT CTACTTCTGC TCTCGATATG GAAACAGAAC ATCAGATACA AGAAACTTTA AATTCCTTAA ATGGAACGAC TAAGATCATC ATCGCTCATA GAATCAGTGC TGTTCGTAAT GCAGATGAGA TCATTTTCTT AGAAAATGGA ACCATTGCAG AACGAGGAAC TCATAATGAC CTTTTAAAGA AAGAAGGACT CTATTATGAG ACCTATATGG CACAGTATGG TGATTATTTA GAAACCTCCA AAGAGGTAAT TGCATGTAAC TATTAA
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Protein sequence | MKISHYLKKY WYRYAFAIFC IFVTVGLDML NPQVTMRIID NVIGEGQRDQ LAPLLVVVLL IGVGRCIFGY LKEYNFDSVS SKISADLRSK LFRHIQTLSV DFFDKNNTGE LMSRVKDDVD RIWDAFNYVS MLLIEVVIHT SIILYCMFHL NKKLFLVPVI AMPLVAILAV LLERKLGGIY EEISEQNATL NTIAQENLAG VRTVKAFARE KFEIQKFLSH NKRYYDLNMS QSKVLTRYQP LFQLITRALP LIIVIYGGYL TIQGEITLGV LAAFVEYSNN ITWPMEMIGW LTNAAASAVA SNKKIKKIFA ENPSIQNPEK PVILDEITGN IEFRNVDFEI DGKEILHNIN FHLPAGKTIG IMGATGAGKT SIINVLQRFY DVKEGEVLLD GVNIKELNLT QLRKSVSLVM QDVFLFSDTI NENVKLGKKT SIEDDEVIHA LKHAQASDFI EQMEEQYDTI IGERGVGLSG GQKQRISIGR AIAKKAPILV LDDSTSALDM ETEHQIQETL NSLNGTTKII IAHRISAVRN ADEIIFLENG TIAERGTHND LLKKEGLYYE TYMAQYGDYL ETSKEVIACN Y
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