Gene Cphy_0009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_0009 
Symbol 
ID5741486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand+ 
Start bp11434 
End bp11871 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content35% 
IMG OID641291081 
ProductBadM/Rrf2 family transcriptional regulator 
Protein accessionYP_001557139 
Protein GI160878171 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATTT CAACGAAAGG ACGATATGCG CTTCGTCTGA TGTTAGATTT AGCTATTAAC 
AATACTGGTG AATTTATTAC AATTAAGAGC ATTGCCGGGA GACAGGAAAT TTCTGATAAG 
TACCTAGAAC AGATTATAAC CCTGTTAAGC AGAGCTGGAT ATGTGAAAAG TTCAAGAGGA 
GCCCAAGGTG GTTATCGGTT AACAAAAGAA CCAAAAGAGT ATACAGTTGG TATGATATTA 
AAATTAATTG AAGGAAGTCT TGCGCCAGTA TCCTGTGTAG AAGAGGAAGA TAACGATTGT 
AATCGATATG GTTCCTGCGC AACTTTATTT GTTTATCAGA AGATAAATGA GGCAGTAAAT 
AATGTAGTTG ATAATATTAC GTTAGAGGAT TTAGTGGAAC GCCATCGAGA ACTTGGTGAA 
AATAACTATG TAATATAA
 
Protein sequence
MKISTKGRYA LRLMLDLAIN NTGEFITIKS IAGRQEISDK YLEQIITLLS RAGYVKSSRG 
AQGGYRLTKE PKEYTVGMIL KLIEGSLAPV SCVEEEDNDC NRYGSCATLF VYQKINEAVN 
NVVDNITLED LVERHRELGE NNYVI