Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_0004 |
Symbol | |
ID | 5744064 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | + |
Start bp | 3870 |
End bp | 4952 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 641291076 |
Product | DNA replication and repair protein RecF |
Protein accession | YP_001557134 |
Protein GI | 160878166 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1195] Recombinational DNA repair ATPase (RecF pathway) |
TIGRFAM ID | [TIGR00611] recF protein |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTGTAA AGTCTCTTGA ATTGAGTAAT TTTAGAAATT ATGAGAACTT ATCTTTGGAG TTTTCTCCAT CGACTAATAT TTTGTATGGA GACAATGCTC AGGGAAAGAC AAACATACTT GAAGCAGTGT TTCTTTGTGC TACCACAAAG TCACATAAAG GAAGTAAGGA CAGAGAAATT ATTAAACTAC AGTCAGAAGA AGCACATATT CGCATGAGGA TAAATCGGGA TGATGTGGAT CATCGGCTTG ATATGCACTT AAAAAAAAAT AAACCCAAAG GTGTTGCTAT TGATGGAATT CCGATTAAAC GATCTTCTGA ATTATTCGGT ATCATTAATG TTGTATTTTT TTCTCCGGAG GATTTATCCA TAATTAAAAA TGGACCTAGC GAACGTAGAC GGTTTATTGA CATGGAACTT TGTCAATTAA GTAAGTTATA TCTACACAAT CTGATAAATT ACAACAAAGT TTTAAATCAA AGAAACAATT TATTAAAGCA AATAGGTTTT AACAAAAGTT TATTGGATAC GCTTTATGTG TGGGATCAGC AATTAATTCA TTTTGGGTCT GCATTGATTA AAGAGAGAGA TGCCTTTATG AAAAGCATGA ATGAACTTAT TATTGCACTA CATAAAAAAC TTAGCGATGG AAAAGAAGAA TTAGAGATCG TTTATGAAGC AAGTGTAGCA GAAAGTGAGT TTGAAAATAA ACTTAAAAAG AGTATGGAAC GTGATATAGC CTTAAAGGTA ACAAACGTAG GACCTCATCG GGATGACCTT AGTTTTCTAA TCAATGGTCA GGATGTCAGA AAGTATGGAT CACAAGGGCA GCAAAGAACT GCTGCATTAT CTTTAAAGCT TGCGGAAATA GAATTAGTAA AACAGGTAAC GAAAGATAAA CCAATTCTAC TGTTAGATGA TGTATTGTCC GAACTAGATA GAAAAAGGCA AAATCAGTTA TTAGATAGCA TTGTTGGAAT TCAAACTATA GTAACCTGTA CCGGTCTTGA AGAATTTGTG AATAACAGAA TAGAGACGGA TCGAATTTAT AAGGTTATTC AAGGAACTGT TGAAAAGGGA TAA
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Protein sequence | MIVKSLELSN FRNYENLSLE FSPSTNILYG DNAQGKTNIL EAVFLCATTK SHKGSKDREI IKLQSEEAHI RMRINRDDVD HRLDMHLKKN KPKGVAIDGI PIKRSSELFG IINVVFFSPE DLSIIKNGPS ERRRFIDMEL CQLSKLYLHN LINYNKVLNQ RNNLLKQIGF NKSLLDTLYV WDQQLIHFGS ALIKERDAFM KSMNELIIAL HKKLSDGKEE LEIVYEASVA ESEFENKLKK SMERDIALKV TNVGPHRDDL SFLINGQDVR KYGSQGQQRT AALSLKLAEI ELVKQVTKDK PILLLDDVLS ELDRKRQNQL LDSIVGIQTI VTCTGLEEFV NNRIETDRIY KVIQGTVEKG
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