| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_4506 |
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| Symbol | atpC |
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| ID | 5756341 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | - |
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| Start bp | 5330698 |
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| End bp | 5331126 |
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| Gene Length | 429 bp |
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| Protein Length | 142 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641290865 |
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| Product | F0F1 ATP synthase subunit epsilon |
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| Protein accession | YP_001556923 |
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| Protein GI | 160877607 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) |
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| TIGRFAM ID | [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria) |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.107248 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAGCCA TGACAGTACA TCTTGATATA GTAAGTGCAG AGAGCAAAAT CTTCTCTGGT
CGTGTAGCTT CGCTGCAAGT GACTGGTTCA GAAGGTGAGT TGGGCATAAT GCATGGCCAT
GCTCCTTTGC TGAGTTATAT CAAACCTGGC ATGGCGCGCA TCGTCAAGCA AGACGGCAGT
GAAGAAGTGT TTTACCTTTC AGGTGGTATT CTGGAAGTAC AACCTTCTAC TGTTTCCGTA
TTGGCTGATG TGGTTATGCG TGCCAAAGAT ATTGATGAGC AAGCGGCATT AGAAGCTAAG
CGTCGTGCAG AAGCCCATAT GGCAAATGCA GGTGCTGACT TCAATTATGA CGCGGCTATG
GTTGAACTAG CTAAGGCTAT GGCTCAATTA CGTGTTGTTG AAACCATCAA GAAAAACATT
GCCAGATAA
|
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| Protein sequence | MAAMTVHLDI VSAESKIFSG RVASLQVTGS EGELGIMHGH APLLSYIKPG MARIVKQDGS
EEVFYLSGGI LEVQPSTVSV LADVVMRAKD IDEQAALEAK RRAEAHMANA GADFNYDAAM
VELAKAMAQL RVVETIKKNI AR
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