| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_4497 |
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| Symbol | |
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| ID | 5756329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | - |
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| Start bp | 5312008 |
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| End bp | 5314458 |
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| Gene Length | 2451 bp |
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| Protein Length | 816 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641290853 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) |
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| Protein accession | YP_001556914 |
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| Protein GI | 160877598 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.635856 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTCGTA AGCTTTCGCT CGCGGTACTG CTCCCTCTGT GTATGCTGAC ACTATATTTA
GTGTTGGTCA TAGGCGAGTA CCTGTTTGAA AGCGATCAAG TGCGTGCTGA ATTGGCGCAG
CGACAATCGA CACTGATAAA GCAGCAGTTG TTCCGGATGC AGAATGTGGT TCAATCGGCG
CAGGCTTTAC AGGATGTGGA GCGGATCGAG CAGGAGGTTT CCTTAGCTGC GCTGGATATG
GGCACTATGG TTTATATCTT AGTTGATGCT GATAGCCGTA TTCGTTTTGC AAACCATACT
GTTTGGCGCG ATAGCAATGC CATGCAAGTC ATTGATGGTT ATGATGCTAC TCGTCATCGT
GCTGTGGTTC AGGCTTTCCT GCCACAAATT CTTGTTAATC TCGAACGCTT AACCATTCAA
GCATATTATC CCGTCTTGCC TCAGTATGGT GGTGCGGTTG ATTTGATTTA TCTTGAAGCC
GATTTAGCGC CTTTAGTCGC CGAAGCTTCC GCTAAGTTAC AACAACGTTT TATGCGGGTT
TGGGGGCTGG GTGGATTATT ACTGATTGGT TTTACCTTCA TTCTCTATTT CCTATTGATC
CGTCCATTCC AAATATTAAG CGAGGCCGCT AAACAGGTAG GGACTTCTTC CTTTTCGACA
TCGATCCCAT GGAGCTCATC AGAAGTCTTA TCATTGCAAG CCAGTTTGCA GCAGGTACAT
GAACGTTTGA GTCGTGCCGT GAAACAGTTG AATGACAGCG AACTGCGCTG GCTGTTTGCG
GTGGAAGGCT CGCGGAACGG TATTTGGGAT TGGGATATCA GTACGGGTGA GGTTTTTCTG
TCTGATCGCT GGAAAGAGAT GATCGGTTAT GCGCCGGATG AATTAGCGGG CGTATTCCAG
ACTTGGGAAA CGCGGTTACA TCCCGATGAT AGGGATATCG TACTTGATGC GTTGCAGGAG
TACGTTAGCG GTAAGAGTAA AGAATTTGAA AGTGTCCATC GACTGCGGCA TAGAGAGGGG
CATTATGTGT GGGTGCTGGA TCGCGGCATG TTGGTTGATT GGGACCCTCA AGGACGTCCG
ACTCGGATGA TCGGCATTCA TATGGATGTG TCAGAAAGTG CCAAAAACCA TGCTGCGATT
AATGAACTTG TGGATCAATC GGTTACGGGT CGCAAGATGT TACCCGATGT CTTTATGGCG
CGACTGTCGC AATTTTTAAC CCAAGGTAAT AGTTCAGGTC AATGGGGATC ATTGCTGCTT
GTTGAGGTGG ATAGGTTAGG CTTGGTCGCA ACTTTAAACT CTCACGAATT AGAGCGTTTA
CTCACGCAAG TGGCTGCACG TCTATCGAGT TATTTCACTG AGAATATTAC CGTTGGCCGA
TTGGAGTCCG GTGATTTTGT TTTGCTGGCT AAAGACTTAG CGATAGATGC TTCAGTGGCT
GCGCGTCGTG CTTTAGCGCT TGCGAGTGAG TTAAGGCAAG TGATTGCTCG ACCATTCCAT
TACGGTCATC ATCACTTTGA GCTCAGCGCG AATGTGGGGA TTTGTTTGCT CGACAGCATA
GAGACCTTAG ATCCAGCTTT AGTCATGCGC CGCGCCGAGC TAGCAACCTT GAGTGCTAAG
CGACCAGGGC AAGCGGGATG CGCTTTCTAT CATGCTGAGA TGGATTTACG TCTGAGCCGT
GATGAACAGT TACAACAGGA ATTACAGACA GCATTACAGC AAGATAGCAT GACGTTAATG
TTCCAACCTG TGATGAATGC GCACAGTGAA TTGGTCTCGG CTGAAGTGCT CACGCGTTGG
TATCGTGCCG ATGGCGAGTT TATCCCACCT GCAGAGTTCG TGGCGTTAGC TGAACAGGGA
GGAATGATTG CAGAACTCGA TCTTTGGGTC GCTAAACGTG TGTGTCAGTT TATTCAGACA
TCCCATGCCC AAGGCCGGAG TTTGCCGACT TTAACTCTTA ATATCAGTGC ATTCTCATTT
GGGCAGGCAG ATTTTCTTGA TGCATTGATT GCGTTAACTA AAGAGCATGG CATTGTGGCT
CATCAACTGG GTATTGAGCT CAATGAGGCC GCATTTTTAA TGCAACCACA GTTTGTGGCT
GAGCGCGTGT CTAAGTTAGT TGATGCAGGG ATAGGCATCG TCCTCGATCA TTTCGGTTCT
GGCTCGAGTG CTTTGAGTTG TTTAGCCAAC CAGCCATTAG TTGCGGTTAA ATTGGATATG
AGTTGTATTG ATTCATTAGC CACAATGCCA CAAAGAGTGA AGGCGTTAAT TGTCTCTGCG
CAGCAGTTTA ATTTGCACGT GGTGGCTAAA GGCGTTGAAT CACCCCAACA CTATCAAGCC
TTTGTTGAAT TTGGCTGTGA TGGTTATCAG GGCTATTTAT TCAGCCGAGC GTTAAACCAA
GTGGACTTTA TCCAGCTTGT TTGTCCTCGT CCTTTATTGC GAAGCGTTTA A
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| Protein sequence | MLRKLSLAVL LPLCMLTLYL VLVIGEYLFE SDQVRAELAQ RQSTLIKQQL FRMQNVVQSA
QALQDVERIE QEVSLAALDM GTMVYILVDA DSRIRFANHT VWRDSNAMQV IDGYDATRHR
AVVQAFLPQI LVNLERLTIQ AYYPVLPQYG GAVDLIYLEA DLAPLVAEAS AKLQQRFMRV
WGLGGLLLIG FTFILYFLLI RPFQILSEAA KQVGTSSFST SIPWSSSEVL SLQASLQQVH
ERLSRAVKQL NDSELRWLFA VEGSRNGIWD WDISTGEVFL SDRWKEMIGY APDELAGVFQ
TWETRLHPDD RDIVLDALQE YVSGKSKEFE SVHRLRHREG HYVWVLDRGM LVDWDPQGRP
TRMIGIHMDV SESAKNHAAI NELVDQSVTG RKMLPDVFMA RLSQFLTQGN SSGQWGSLLL
VEVDRLGLVA TLNSHELERL LTQVAARLSS YFTENITVGR LESGDFVLLA KDLAIDASVA
ARRALALASE LRQVIARPFH YGHHHFELSA NVGICLLDSI ETLDPALVMR RAELATLSAK
RPGQAGCAFY HAEMDLRLSR DEQLQQELQT ALQQDSMTLM FQPVMNAHSE LVSAEVLTRW
YRADGEFIPP AEFVALAEQG GMIAELDLWV AKRVCQFIQT SHAQGRSLPT LTLNISAFSF
GQADFLDALI ALTKEHGIVA HQLGIELNEA AFLMQPQFVA ERVSKLVDAG IGIVLDHFGS
GSSALSCLAN QPLVAVKLDM SCIDSLATMP QRVKALIVSA QQFNLHVVAK GVESPQHYQA
FVEFGCDGYQ GYLFSRALNQ VDFIQLVCPR PLLRSV
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