Gene Sbal195_4496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_4496 
Symbol 
ID5756328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp5311068 
End bp5312051 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content46% 
IMG OID641290852 
Productalpha/beta hydrolase fold 
Protein accessionYP_001556913 
Protein GI160877597 
COG category[I] Lipid transport and metabolism 
COG ID[COG2267] Lysophospholipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.494887 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAAG CCAAAGCGAC ATTTTCGACT GAACACGATT TAAATACCTC AGAGCAGCAA 
GCCTTCTGGC AAAGCGTTGT TCAAGACACG CTGATCACAG CTGATGGCAT CACGCTGGCT
TATATGATGG TCAAACATCC CCAAGCACAT ACCGCAATCG TTCTCAGCAG TGGCCGAGTT
GAATCCTATT TAAAGTATCA AGAATTGGTC TTCGACTTAT ACCAACAGGG TTACTCAGTT
TATGCCATCG ATCACCGTGG CCAAGGGCTG TCGGATCGTA TGACAATCAA TCCGCACATG
GGTCATGTGC GAAGATTTAA TGATTATATT GATGATTTTG CACTGTTTAT GCAGAAGAAA
GTGTTACCGC AAAACGACAA ACAGCTCATG CTACTCGGTC ATTCAATGGG TGGTGCGATT
GGCACTTTGT ATCTCAAACA GCATCCCGAT ATTTTTACCG CCGCGGCATT TTCAGCGCCC
ATGTATGGCA TCAAATTACC TATGCCAAAA GCATTCGTGC GCTGGTTAGC CAGTAAGCTC
GATACCACTC TCAATGACGG CGAACCTAAC TATGTGCTTG GAGGACAGAA CTATAAACCG
GTTCCCTTCA AAGGAAATGA GCTAACCCAT TGCCAAAGTA GATACCAAGC CTATCGAGAG
CTGTATGACG CGGCCCCTAA GTTACAACTC GGTTCCCCAA CTAACCGTTG GTTGACAGAA
TCTTTAGATG CAGCAGACAC TTGCGTACTG GCAACAGCGC AAATTCGCAC GCCGATCCTG
ATACTGCAAG CGAGTGAAGA TAAGATTGTT GATAATGCGG CCCAGAATCT TGCAGTGAGC
ACTCATTGCC AATTGAAGGT GATAGCAGGG GCTGCCCATG AGATTTTTAT GGAAAAAGAC
GCCTATCGAA ACCAAGCCTT AAATTATGCC CTCGACTTCT TTAAACGCTT CGCAATAAAG
GACGAGGACA AACAAGCTGG ATAA
 
Protein sequence
MSQAKATFST EHDLNTSEQQ AFWQSVVQDT LITADGITLA YMMVKHPQAH TAIVLSSGRV 
ESYLKYQELV FDLYQQGYSV YAIDHRGQGL SDRMTINPHM GHVRRFNDYI DDFALFMQKK
VLPQNDKQLM LLGHSMGGAI GTLYLKQHPD IFTAAAFSAP MYGIKLPMPK AFVRWLASKL
DTTLNDGEPN YVLGGQNYKP VPFKGNELTH CQSRYQAYRE LYDAAPKLQL GSPTNRWLTE
SLDAADTCVL ATAQIRTPIL ILQASEDKIV DNAAQNLAVS THCQLKVIAG AAHEIFMEKD
AYRNQALNYA LDFFKRFAIK DEDKQAG