| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_4481 |
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| Symbol | tdh |
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| ID | 5756312 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | + |
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| Start bp | 5293375 |
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| End bp | 5294400 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641290836 |
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| Product | L-threonine 3-dehydrogenase |
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| Protein accession | YP_001556898 |
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| Protein GI | 160877582 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
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| TIGRFAM ID | [TIGR00692] L-threonine 3-dehydrogenase
[TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.155025 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0226787 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAGCAC TAAGCAAGTT AAAAGCCGAA AAAGGTATTT GGTTAGTCGA TGCGCCTAAG
CCAGTAATGG GCCACAACGA TCTGCTGATC AAAATTAAAA AAACGGCGAT TTGTGGCACC
GACATGCACA TCTACAACTG GGACGAGTGG TCACAAAAAA CCATTCCCGT TCCTATGGTT
GTTGGCCATG AATATGTAGG CGAAGTGGTT GATATCGGCC AAGAAGTGCG TGGTTTTAAG
ATTGGCGACC GCGTATCTGG CGAAGGTCAT ATTACCTGCG GCCACTGCCG TAACTGTCGC
GCTGGCCGCA CCCATTTATG CCGCAACACC TCTGGTGTCG GTGTGAACCG TGAAGGTTCA
TTCGCGGAAT ACTTAGTGAT TCCCGCCTTT AACGCCTTTA AAATCCCTGA TGACATCAGC
GATGATTTAG CGTCAATCTT CGACCCGTTT GGTAACGCTG TGCACACAGC ATTATCCTTC
GATTTAGTCG GTGAAGACGT CTTGATCACA GGCGCAGGTC CCATCGGCAT AATGGCTGCG
GCAGTATGTC GTCACGTAGG TGCGCGCCAT GTAGTGATCA CAGACGTTAA CGAATACCGC
TTAGAGCTGG CCCGTAAAAT GGGTGCCACT CGCGCAGTCA ATGTGTCTAA GGAAAGCCTG
AAAGACGTGA TGAAAGAACT GGGCATGACC GAAGGTTTCG ACGTCGGTTT GGAAATGTCT
GGCGTACCAT CAGCCTTCCA CGCCATGTTA GATACCATGA ACCACGGCGG CAAAGTCGCT
ATGCTGGGTA TTCCTGGTGG CGAAATGGCG ATTGATTGGA GCAAAGTGAT CTTCAAAGGT
TTGGTCATTA AAGGCATCTA CGGCCGCGAA ATGTTCGAAA CTTGGTACAA GATGGCGAGC
CTTATCCAAT CTGGCTTAGA TATTTCGCCT ATCATCACTC ACCACTTCAA GATTGATGAT
TTCCAACAAG GTTTCGACGC TATGGGCTCG GGCCAATCAG GTAAAGTAAT CCTCAGCTGG
GATTAA
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| Protein sequence | MKALSKLKAE KGIWLVDAPK PVMGHNDLLI KIKKTAICGT DMHIYNWDEW SQKTIPVPMV
VGHEYVGEVV DIGQEVRGFK IGDRVSGEGH ITCGHCRNCR AGRTHLCRNT SGVGVNREGS
FAEYLVIPAF NAFKIPDDIS DDLASIFDPF GNAVHTALSF DLVGEDVLIT GAGPIGIMAA
AVCRHVGARH VVITDVNEYR LELARKMGAT RAVNVSKESL KDVMKELGMT EGFDVGLEMS
GVPSAFHAML DTMNHGGKVA MLGIPGGEMA IDWSKVIFKG LVIKGIYGRE MFETWYKMAS
LIQSGLDISP IITHHFKIDD FQQGFDAMGS GQSGKVILSW D
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