| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_4468 |
|---|
| Symbol | |
|---|
| ID | 5756299 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | + |
|---|
| Start bp | 5278373 |
|---|
| End bp | 5279536 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 641290823 |
|---|
| Product | UDP-glucose/GDP-mannose dehydrogenase |
|---|
| Protein accession | YP_001556885 |
|---|
| Protein GI | 160877569 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1004] Predicted UDP-glucose 6-dehydrogenase |
|---|
| TIGRFAM ID | [TIGR03026] nucleotide sugar dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATATTG TTGTTGTGGG GATGGGCTAT GTTGGCCTAT CAAATGCAGT CTTATTGGCG
CAGCAAAATC GAGTTACTGC AATTGATTTA GTTCCTGAAC GTGTCAAGCA AGTTAACGAG
CGTAAATCCA CTGTGGTCGA TGAATTAATC GAAGATTACC TGCAAAACAA ACCGTTGAAT
TTAACTGCGA CAACGGAAAA TGTAGCCTTT CAATCGGCTG ACTTTGTGAT TATTGCGACT
CCAACAGACT ACGATCCTCA GACTAATTAT TTTAATACCC ATTCGGTTGA AAGCGTCATT
CGTGATGTAC TCGCAGTTAA TCCTGATACG ACGATTATCA TCAAATCGAC TGTACCCGTC
GGCTATACCA CTGCATTAAG GCACAAGTTT AAGAGCGACA ACATACTCTT TTCTCCAGAG
TTTTTACGCG AAGGGAAAGC CTTGCATGAC AACCTTCATC CCTCACGGAT CGTCGTCGGT
GAACGCTCGG CGCGTGCCCA AGTCTTTGCA GACCTTTTAG CCAAGGCGGC AATCAAGCAA
GATATTCCTA TTTTGCTGAC CGATAGCACC GAAGCCGAAG CGATTAAGTT ATTTGCTAAT
ACATTTCTCG CCATGCGGGT CGCCTACTTT AACGAACTCG ATACCTATGC AGAGAGTCGA
GGATTAAATA CTCGCCAGAT TATTGAGGGG GTTAGCCTCG ATCCGCGTAT TGGTGATTAT
TACAACAATC CTTCTTTTGG CTATGGCGGG TACTGTCTTC CGAAAGACAC TAAGCAATTA
CTGGCTAACT ACAATGATGT CCCAAACAAT TTAATCAGTG CCATTGTCGA CTCAAACACC
ACACGAAAAG ACTTTATCGC CGACGCTATT ATCCGTAAGC AGCCAAAATG TGTAGGAATT
TATCGTTTGA TCATGAAAGC CGATTCAGAC AATTTCCGCG CCTCAGCAGT GCAAGGCGTG
ATGAAGCGCA TTAAAGCGAA AGGCATTGAA GTCGTCGTGT TTGAGCCTGT ACTTAAAGAA
GATTACTTTT TCAAATCTCG CGTGATGAGA GACTTAACTG AATTTAAGTC AATATGTGAT
GTGATCGTCT CCAACCGTAT GGTTGATGAA CTCAATGATG TTGCGGATAA AGTCTATACC
CGAGATCTAT TTCACCATGA TTAA
|
|---|
| Protein sequence | MDIVVVGMGY VGLSNAVLLA QQNRVTAIDL VPERVKQVNE RKSTVVDELI EDYLQNKPLN
LTATTENVAF QSADFVIIAT PTDYDPQTNY FNTHSVESVI RDVLAVNPDT TIIIKSTVPV
GYTTALRHKF KSDNILFSPE FLREGKALHD NLHPSRIVVG ERSARAQVFA DLLAKAAIKQ
DIPILLTDST EAEAIKLFAN TFLAMRVAYF NELDTYAESR GLNTRQIIEG VSLDPRIGDY
YNNPSFGYGG YCLPKDTKQL LANYNDVPNN LISAIVDSNT TRKDFIADAI IRKQPKCVGI
YRLIMKADSD NFRASAVQGV MKRIKAKGIE VVVFEPVLKE DYFFKSRVMR DLTEFKSICD
VIVSNRMVDE LNDVADKVYT RDLFHHD
|
|---|
| |