| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_4428 |
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| Symbol | |
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| ID | 5756259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | + |
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| Start bp | 5233664 |
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| End bp | 5234713 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641290783 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001556845 |
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| Protein GI | 160877529 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGGTATT TAATGATAGG TTTATACCTG CTGTGTTTTG CAGTCCACGC AAGCGCAGTA
CCTGTAACAG TCGCCTTGCC CCAAACGGGC AGCACCAATG AACTGTTGAC ACTCAGTGGC
TCCATTAAAT CCGCACGGGT GGCTCGCTTA TCGGCACGTA CCGATGGCCT AGTCGCCAAA
GTGCTGGTCG ATGCGGGCTC CCAAGTCCGC GCAGGCCAGC CTTTACTCGC ACTCGACGAT
ACCTTAGCCG TACATCAATT AGCACAGCGT CAAGCTGATG TGATGGCCGC TAAGACCATG
CTGGCAGAAA AGCAGCGACT CCTCACCGAG GCGCAAACAC TCAGCGCTCA GCAGTTATTC
CCCGAAACGG AGCGCGCGAT TCGCCAAGCG GCGTTAACCG AGGCCGAAGC CAATCTGCAG
AGTTTAACGG CAGCACTCGC ACACCAAAAA GAGGTGGTCG CCCGCCACCA ACTGATGGCG
CCGTTTGCGG GGGTGATTTC AAGCAAACAA ACTGAAACCG GTGAGTGGGT TAATGTCGGC
ACTGAAATCT TCACCTTAGT GTCCCAAGAG CAGCTCTGGC TCGACATTCA AGTGCCACAG
GAAATGTTCC AAAGCGTAGC CACTGCGACT CACGTGGACA TTGCCGCCGA CATGCTGCCT
GAACAGCAGT TTATCGGCCA TGTGAATGCA CTCGTCCCCG TGAGCGACCA CAATGCTCGC
AGCTTCTTGG TACGCTTGAC TATTCCCGAA GCGGATGGAC TTTTGATGCC CGGCACATCA
GCCACTGCCA CCTTCCACTT ACAGCGGGCG CAACACAGTG TTGTCGTGCC GCAAGATGCG
CTAGTCCGTC ACCCCGACGG CCAGTTCAGC GTCTTTACCG TGCAAAACAA CATAGCCCAA
CGCCATACCG TTCAAGTGGG CCATACGAGC GCCATCGGGA TTGAAATCCT CAGTCCATTA
CCCAAAGACG CGCCCGTGGT GATCCGCGGT AACGAGAGCC TACAAGACCA ACAGCCAGTC
TCTGTACTCA ACTCTGCTGT AGGAGGTTAG
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| Protein sequence | MRYLMIGLYL LCFAVHASAV PVTVALPQTG STNELLTLSG SIKSARVARL SARTDGLVAK
VLVDAGSQVR AGQPLLALDD TLAVHQLAQR QADVMAAKTM LAEKQRLLTE AQTLSAQQLF
PETERAIRQA ALTEAEANLQ SLTAALAHQK EVVARHQLMA PFAGVISSKQ TETGEWVNVG
TEIFTLVSQE QLWLDIQVPQ EMFQSVATAT HVDIAADMLP EQQFIGHVNA LVPVSDHNAR
SFLVRLTIPE ADGLLMPGTS ATATFHLQRA QHSVVVPQDA LVRHPDGQFS VFTVQNNIAQ
RHTVQVGHTS AIGIEILSPL PKDAPVVIRG NESLQDQQPV SVLNSAVGG
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