| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_4385 |
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| Symbol | |
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| ID | 5756216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | - |
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| Start bp | 5183021 |
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| End bp | 5184166 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641290741 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001556803 |
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| Protein GI | 160877487 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.912914 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGCAGA CAATTAAACT TGCCTCAGTT ATAAGCGTGG CGTTATGGAT GGCAGCTTGC
AGCCCTCAAG AAGAGAAAGC TCAGGCGGGC GCTGGCCCAC GTAGTATGGA AGTGGGAATC
CTTAATGTTG TTGCCCAGCC ACAAGTGATT CAGGTGGAGT TACCAGGACG CAGTAAAGCT
TTCCTCGAGG CCGAAGTTCG TCCACAGGTG AGCGGTATTA TCACTAAGCG TAGTTTTGTT
GAAGGTGGTA ATGTGAAACA GGGTGAATCC TTGTATCAAA TTGACTCTGC AACTTATAAA
GCCGCGTTAG TGAGTGCCAA TGCCGATTTA GCCAGAGCCA ATGCGGGTTT AGCCTCAGCA
AAAGCTAAGG CTGCACGTTA TCAGCAACTG GTGAAAACCA ACGCCATCAG TAAGCAAGAA
TTTGATGAAG CTGAAGCGGC ATATAAAGAA GCATTAGCGA ATGTCACCGT GGCAGAAGCT
GCGATTAACA CCGCTAAAAT CAACCTGCAA TACACTGAAG TATTAGCGCC TATCTCTGGT
CGTATCGGTA AATCGAGTGT GACTGCGGGT GCGTTAGTGA CAGCGAACCA AAGCCAAACG
CTGGCGACGA TTCAACAACT TGATCCAATC AATGTGGATA TCGCGCAATC GAGTGCGCAG
TTGTTACGTC TTAAAGCTAA GTTGAAGCAA GGTAAGCTAC AAGCTTCAGA AAATGCTGAT
GTGCAGCTGT TGCTCGAAGA TGGCACACAA TACAGCCATC CAGGTAAGTT GCAGTTCGCC
GAAGTGAGTG TGGACCCAAA TACTGGTTCA GTAATTCTGC GCGCCGAGTT CCCGAACCCT
GAAGGTATCT TGTTACCTGG TATGTATGTT CGCGCTATGT TGAATGCGGG CACCGATCCA
CAGGCTATCT TGGTTCCACA AAAAGCCATC ACGCGTAACT CTAAGGGTCA AGCAGTGGCT
ATGGTTGTAA ATGACCAAGG TTTAGTCGAA TTGAAAATTG TGACGACCGC TGAAGTGATT
GACAACCAAT GGCGAGTCAC TTCTGGTTTA GCTGTGGGCG ATAAACTGAT TGTGGAAGGA
TTGCAGAAAA TTCGTCCAGG CGCTCCAGTA ACCACCAAAG TTATTTCTGA AACGCAAGCA
CAATAG
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| Protein sequence | MRQTIKLASV ISVALWMAAC SPQEEKAQAG AGPRSMEVGI LNVVAQPQVI QVELPGRSKA
FLEAEVRPQV SGIITKRSFV EGGNVKQGES LYQIDSATYK AALVSANADL ARANAGLASA
KAKAARYQQL VKTNAISKQE FDEAEAAYKE ALANVTVAEA AINTAKINLQ YTEVLAPISG
RIGKSSVTAG ALVTANQSQT LATIQQLDPI NVDIAQSSAQ LLRLKAKLKQ GKLQASENAD
VQLLLEDGTQ YSHPGKLQFA EVSVDPNTGS VILRAEFPNP EGILLPGMYV RAMLNAGTDP
QAILVPQKAI TRNSKGQAVA MVVNDQGLVE LKIVTTAEVI DNQWRVTSGL AVGDKLIVEG
LQKIRPGAPV TTKVISETQA Q
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