| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_4384 |
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| Symbol | |
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| ID | 5756215 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | - |
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| Start bp | 5179877 |
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| End bp | 5183011 |
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| Gene Length | 3135 bp |
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| Protein Length | 1044 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641290740 |
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| Product | hydrophobe/amphiphile efflux-1 (HAE1) family protein |
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| Protein accession | YP_001556802 |
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| Protein GI | 160877486 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACGTT TTTTTATTGA TCGCCCCATC TTTGCGTGGG TGATCGCCTT GATTATTATG
CTGGCGGGGA TCCTCTCGAT CCGCTCGCTG CCAGTGTCTC AATATCCTAA CATTGCACCA
CCTACCGTGG TGATCAGTGC TAACTATCCT GGCGCTTCCG CTAAGATCGT TGAAGATTCT
GTAACTCAGG TGATTGAGCA ACGTATGACG GGTATCGATC ACCTCCGTTA TATCTCCTCA
ACCAGTGACA GTTTTGGTAA TGCGTCTATT ACCTTAACCT TCAACGCCGA AGCCGATCCG
GATATTGCAC AGGTTCAAGT TCAGAACAAG TTACAGGGCG CTATGACCCT GTTACCGCAA
GAAGTGCAGT CGCAAGGGGT TAACGTTAAC AAGTCGAGTT CAGGCTTCTT AATGGTATTA
GGCTTCGTAT CGACCGACGG TTCGTTAGAT AAAGGCGATA TCGCCGACTA TGTTGGTGCG
AACATTCAAG ATCCTATGAG CCGTGTTCCT GGTGTAGGTG AGATTCAGTT GTTCGGTGCC
CAATATGCGA TGCGTATATG GCTAGATCCG TTGAAGTTGA CTCAATATAA TTTAACTAGC
TTAGATGTTA TTGCGGCGAT TCGTTCTCAA AACGCTCAAG TCTCCGCTGG ACAGTTAGGT
GGCGCGCCAT CTGTGGCTGG CCAAGAGCTG AACGCGACTG TATCGGCGCA AAGTCGTTTA
CAAACGGCGG AAGAGTTTCG CAAGATTATC CTTAAATCGG ATATTTCAGG TGCAAATGTC
TTCCTCGGTG ATGTGGCGCG AGTTGAGTTA GGTTCTGAAA GTTATGCCGT GGTGTCATTG
TATAATGGTC AACCTGCAAC AGGGTTAGCG ATTAAGCTGG CAACGGGTGC TAACGCGCTG
GATACCGCAT CAGCGGTTCG TGAAAAAATT GCTGAGATGA AGCCTTTCTT CCCGCAGGGG
TTAGAAGTGG TTTATCCATA CGATACAACA CCTTTCGTAG AGCAATCTAT CGAAGGTGTG
GTGCATACCT TGCTTGAAGC GATCGTACTT GTGTTCGTCA TCATGTACCT CTTCCTGCAA
AACTTCCGTG CAACCTTGAT CCCGACCATT GCGGTACCTG TGGTATTGCT GGGTACCTTT
GCGATTCTAT CGATGGCGGG TTTCTCGATT AACACCCTAA CCATGTTCGC TATGGTGCTC
GCCATCGGTT TGCTGGTGGA CGATGCGATT GTGGTGGTGG AAAACGTCGA GCGGGTGATG
TCCGAAGAGG GCTTAAGTCC ACTCGAAGCG ACGCGTAAGT CGATGGACCA AATTACCGGT
GCCTTAGTCG GTATTGGTCT GACCCTATCT GCTGTGTTTG TACCTATGGC ATTTATGTCA
GGTTCAACGG GTGTGATCTA CCGTCAGTTC TCGATCACTA TCGTCTCTGC GATGGCGCTG
TCTGTACTGG TGGCGTTGAT TTTAACGCCA GCACTGTGTG CGACTATGCT CAAGCCAGTC
AAGAAGGGCC ATGGTCACAT AGAAACAGGC TTCTTCGGTT GGTTTAACCG TACTTTCGAC
AAGCTGACTA ATCGTTATGA GTCGAGCGTG GCTGGTATCA TCAAGCGCAG CTTCAGAGTC
ATGACGATTT ACGTTGTGCT GGTCATTGCA GTGGGTTGGA TCTTCATCCG TATGCCTACC
GCCTTCTTGC CAGACGAAGA CCAAGGTATT TTGTTTACCC AAGCTATTTT GCCGACTAAC
TCAACCCAAG AAAGCACCCT AAAAGTATTG GAGAAAGTTT CTGATCACTT TATGGCTGAA
GAAGGCGTGA GATCGGTATT TAGCGTGGCG GGCTTCAGTT TTGCTGGTCA AGGGCAAAAC
ATGGGTATCG CCTTCGTTGG CTTGAAGGAT TGGTCTGAGC GTGAAGCGCC TGGCATGGAC
GTTAAGTCTA TTGCGGGTCG TGCCATGGGT GTGTTCGGCC AGATGAAAGA TGCCTTAGTC
TTTGCCTTCG TACCGCCTGC GGTTATCGAG TTGGGTACGG CTAACGGTTT CGACATGTAC
TTGCAGGATA AGAACGGCCA AGGTCACGAG AAGTTAGTGG CGGCACGTAA CCAACTGCTA
GGCATGGCGG CACAGAATCC AAATCTGGTG GGCGTGCGTC CTAACGGTCA AGAAGATGCG
CCGATTTATC AATTACATGT AGATCACGCT AAGTTAAGCG CGTTAGGCAT TGAAATCACT
AATGTGAACA GTGTGCTTGC CACGGCTTGG GGTGGTTCTT ATGTGAACGA CTTTATTGAC
CGCGGCCGCG TGAAGAAAGT GTATGTGCAA GGTGATGCCC AGTATCGTAT GCAACCAGGA
GATTTAGACA CTTGGTATGT GCGTAATAAC AAGGGCGACA TGGTGCCATT CTCAGCCTTT
GCTACGGGTA CATGGGAATA CGGTTCCCCA CGTCTAGAGC GCTTTAACGG CTTACCGTCG
ATGAACATTC AGGGTGCTAC GGCTCCTGGG TTCAGTACCG GCGCGGCGAT GGAAATCATG
GAAGACCTTG CTAAGCAGCT TCCTCCTGGA TTTGGTGTTG AGTGGAACGG CTTATCGTAC
GAAGAGCGTC TATCGGGTAA CCAAGCGCCT GCGCTGTATG CCTTGTCGAT CTTAGTGGTA
TTCCTCGTAC TCGCTGCACT CTATGAGAGC TGGTCGGTGC CGTTTGCCGT TGTGCTTGTG
GTGCCACTCG GGATCATCGG TGCCTTGATT GCAATGAATG GTCGCGGCTT GCCAAACGAC
GTATTCTTCC AAGTGGGACT GTTAACCACA GTAGGTTTGG CAACTAAGAA TGCCATCTTG
ATTGTGGAAT TCGCGAAAGA GTTCTACGAG AAAGGTTCTG GCTTAGTCGA GGCGACCCTG
CATGCGGTAC GTGTACGTTT GCGCCCTATT TTGATGACGT CTCTTGCCTT TGGTTTAGGT
GTCGTGCCGT TAGCCATTAG CTCGGGTGTG GGTTCTGGTA GCCAAAACGC CATTGGTACT
GCGGTACTTG GCGGTATGAT GAGCTCGACC TTCCTAGGGA TTTTCTTCGT ACCATTATTC
TTCGTGATAG TGGAGCGTAT CTTCAGTAAG CGTGAGAAGA AAGCTAAAGA AGAGAAGCCA
AGCTCAGCTG AATAA
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| Protein sequence | MARFFIDRPI FAWVIALIIM LAGILSIRSL PVSQYPNIAP PTVVISANYP GASAKIVEDS
VTQVIEQRMT GIDHLRYISS TSDSFGNASI TLTFNAEADP DIAQVQVQNK LQGAMTLLPQ
EVQSQGVNVN KSSSGFLMVL GFVSTDGSLD KGDIADYVGA NIQDPMSRVP GVGEIQLFGA
QYAMRIWLDP LKLTQYNLTS LDVIAAIRSQ NAQVSAGQLG GAPSVAGQEL NATVSAQSRL
QTAEEFRKII LKSDISGANV FLGDVARVEL GSESYAVVSL YNGQPATGLA IKLATGANAL
DTASAVREKI AEMKPFFPQG LEVVYPYDTT PFVEQSIEGV VHTLLEAIVL VFVIMYLFLQ
NFRATLIPTI AVPVVLLGTF AILSMAGFSI NTLTMFAMVL AIGLLVDDAI VVVENVERVM
SEEGLSPLEA TRKSMDQITG ALVGIGLTLS AVFVPMAFMS GSTGVIYRQF SITIVSAMAL
SVLVALILTP ALCATMLKPV KKGHGHIETG FFGWFNRTFD KLTNRYESSV AGIIKRSFRV
MTIYVVLVIA VGWIFIRMPT AFLPDEDQGI LFTQAILPTN STQESTLKVL EKVSDHFMAE
EGVRSVFSVA GFSFAGQGQN MGIAFVGLKD WSEREAPGMD VKSIAGRAMG VFGQMKDALV
FAFVPPAVIE LGTANGFDMY LQDKNGQGHE KLVAARNQLL GMAAQNPNLV GVRPNGQEDA
PIYQLHVDHA KLSALGIEIT NVNSVLATAW GGSYVNDFID RGRVKKVYVQ GDAQYRMQPG
DLDTWYVRNN KGDMVPFSAF ATGTWEYGSP RLERFNGLPS MNIQGATAPG FSTGAAMEIM
EDLAKQLPPG FGVEWNGLSY EERLSGNQAP ALYALSILVV FLVLAALYES WSVPFAVVLV
VPLGIIGALI AMNGRGLPND VFFQVGLLTT VGLATKNAIL IVEFAKEFYE KGSGLVEATL
HAVRVRLRPI LMTSLAFGLG VVPLAISSGV GSGSQNAIGT AVLGGMMSST FLGIFFVPLF
FVIVERIFSK REKKAKEEKP SSAE
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