Gene Sbal195_4280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_4280 
Symbol 
ID5756111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp5060220 
End bp5061044 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content48% 
IMG OID641290636 
Productputative signal transduction protein 
Protein accessionYP_001556698 
Protein GI160877382 
COG category[T] Signal transduction mechanisms 
COG ID[COG1639] Predicted signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0660971 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTCAG CTGCGTTACT CAATCGAGTG GATGAATTAC CCAGGTTACC CAAGGCGATC 
AGTGAACTAT TAGACGCAGT CAATGATGAT AATGCGACAG TAAAAAGTAT TGCCACTAAG
GTTGCGCACG ATCCCTTAAT CAGCGCGAGG GTATTACGCC TTGCCAACTG TGCCCACTAT
GGACGCAGTC GAGAGGTGGG TACGATCGAC GAAGCCGTGG TGCGTCTTGG GATGCAAACC
CTGCGTACTT TAGTGCTTGC ATCGGCCGTA ATTGGTGCGG TTCCTAAGTG TGAAGGAATC
GACTTAGCCC AGTTTTGGGG GCAAACCTTT GAGATTGCTC TATACAGCCA AGAAATGGCG
AAACGTTGTG GTGCTATACC TGAAGAAGCA TTTACCTGCG GTATCTTGCA CCGTATTGGC
GACTTACTGA TTGCGGCTGT GTCACCTGAA GATGCGGCGA AAATTGCTGA AGCCGTGGCG
CAGGGCAAAG ATAAGCATGA GTTTGAACGT GAGTTGCTTG GATATGATTC ACCCGATATC
GGCGCATTGC TGGCCAAAAA TTGGAAATTC ACCACAGCGT TGGTGGAAGG TATTTTATAT
CAAGATCATC CTAAGGATTC GGACCCATTT TCAAAACTTG CAGCATTACT ATGCCTATCT
TACAAAGTGC TGGATGAGTG GGATACCATT GAGGATGATG AGAAAACCAG TTGGTTATCC
CAGTTAGCCA CCAAGAAAGG ATTAAGAATG GAGATGGGTG GTTTGCGGAC TAAGTTGACT
GAGTTACGCG GTTCAGGGTT CGAAATCGGT AGAGCCTTAG CTTAG
 
Protein sequence
MDSAALLNRV DELPRLPKAI SELLDAVNDD NATVKSIATK VAHDPLISAR VLRLANCAHY 
GRSREVGTID EAVVRLGMQT LRTLVLASAV IGAVPKCEGI DLAQFWGQTF EIALYSQEMA
KRCGAIPEEA FTCGILHRIG DLLIAAVSPE DAAKIAEAVA QGKDKHEFER ELLGYDSPDI
GALLAKNWKF TTALVEGILY QDHPKDSDPF SKLAALLCLS YKVLDEWDTI EDDEKTSWLS
QLATKKGLRM EMGGLRTKLT ELRGSGFEIG RALA