Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_4195 |
Symbol | |
ID | 5756023 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 4960791 |
End bp | 4961465 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641290549 |
Product | ribulose-phosphate 3-epimerase |
Protein accession | YP_001556614 |
Protein GI | 160877298 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCCAT TCTTGATTGC TCCATCGATT TTATCTGCCG ATTTTGCCCG TTTGGGCGAT GATGTAAAAG CCGTGTTAGA TGCGGGGACC GACGTAGTGC ATTTTGATGT GATGGATAAT CACTATGTTC CTAACTTAAC AATTGGCCCT ATGGTGTGCC AAGCGCTGCG TAACTACGGT ATTACCGCCG ATATTGATGT GCATTTGATG GTCAAGCCAG TTGACCGCAT CGTGCCTGAT TTTGCTAAAG CGGGTGCGTC TATTATTACT TTCCATCCAG AAGCTTCAGA ACACGTCGAT CGCACGCTAC AGTTGATCAA AGAGTGTGGC TGTAAAGCGG GTCTCGTGTT TAACCCTGCC ACACCACTGC ATTATCTCGA CCATGTGATG GATAAGCTCG ATGTGATTCT ATTGATGTCG GTCAACCCTG GTTTTGGTGG TCAATCTTTT ATCCCATCGA CCTTAGATAA GCTGCGCCAA GTGCGTGCGC GTATCGATGC CAGTGGGTTC GATATTCGTT TAGAAGTGGA TGGCGGCGTT AAGGTCGACA ATATTGCCGA AATCGCCGCC GCCGGTGCTG ACATGTTTGT TGCGGGTTCT GCCATTTTCG GCAAGCCAGA TTACAAAACC GTTGTTGATG AGATGCGTGC CGAACTTGCT AAAGTTGGGG CATAA
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Protein sequence | MRPFLIAPSI LSADFARLGD DVKAVLDAGT DVVHFDVMDN HYVPNLTIGP MVCQALRNYG ITADIDVHLM VKPVDRIVPD FAKAGASIIT FHPEASEHVD RTLQLIKECG CKAGLVFNPA TPLHYLDHVM DKLDVILLMS VNPGFGGQSF IPSTLDKLRQ VRARIDASGF DIRLEVDGGV KVDNIAEIAA AGADMFVAGS AIFGKPDYKT VVDEMRAELA KVGA
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