Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_4052 |
Symbol | |
ID | 5755875 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 4781389 |
End bp | 4782816 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641290402 |
Product | dihydrolipoamide dehydrogenase |
Protein accession | YP_001556472 |
Protein GI | 160877156 |
COG category | [C] Energy production and conversion |
COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00676379 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTAACG AAATCAAAAC TCAGGTAGTG GTATTAGGTG CAGGTCCTGC AGGTTATTCT GCGGCTTTCC GTGCAGCGGA CTTAGGTCTA GAAACCATTA TCGTTGAACG TTTTAGCACT TTAGGCGGCG TGTGTCTTAA TGTGGGTTGT ATCCCATCTA AAGCCCTATT ACATGTTGCT AAAGTTATCG AAGAAGCCAA AGCCGTTGCT GCTCACGGTG TGGTTTTCGG CGAGCCAACT ATCGATTTAG ATAAGTTACG TGGCTTTAAA GAAAAAGTCA TTGGCCAATT AACTGGCGGA TTGGGCGGTA TGTCCAAAAT GCGTAAAGTT AACGTGGTTA ACGGTTTTGG TAAATTCACT GGCCCTAACA CGCTAGAAGT GACTGCTGAA GATGGCACTG TCAAAGTGGT TCAATTCGAG CAAGCTATCA TTGCTGCGGG TTCTCGCCCA ATCAAACTGC CATTCATTCC GCATGAAGAT CCACGTATTT GGGATTCGAC TGACGCATTA GAACTGAAAG AAGTTCCAGG CAAATTGTTA GTGATGGGCG GCGGTATTAT CGGCCTAGAA ATGGGTACTG TGTACGCTTC TTTAGGCAGC GAGATCGACG TGGTTGAAAT GTTCGACCAA GTGATCCCAG CGGCTGATAA AGACGTTGTT CGCGTATTCA CTAAGCAAAT CAAGAAGAAA TTCAACCTGA TCCTTGAAAC TAAAGTCACA GCGGTAGAAG CCCGTGAAGA CGGTATCTAT GTTTCTATGG AAGGTAAGAG CGCACCAACT GAAGCAGTCC GTTACGATGC CGTATTGGTA GCAATTGGCC GTGCACCTAA TGGCAAGTCG TTAGATGCTG AAAAAGCAGG TGTTAACGTT GATGAGCGTG GCTTTATCAA GGTTGATAAG CAACTGCGTA CTAACGTACC GCACATCTAT GCAATTGGTG ACATCGTTGG TCAACCTATG TTGGCTCACA AAGGCGTGCA CGAAGGCCAC GTAGCGGCTG AAGTTATCGC TGGCATGAAG CACTACTTCG ATCCAAAAGT GATCCCATCA ATTGCTTACA CTGACCCAGA AGTAGCTTGG GTTGGTTTAA CTGAGAAAGA AGCGAAAGAG CAAGGTATTG CTTACGAAAC CGCAACTTTC CCATGGGCAG CAAGTGGCCG CGCTATCGCA TCTGATGCGA GCGAAGGCAT GACTAAGCTG ATTTTCGACA AAGACACTCA TCGCGTAATC GGTGGTGCGA TTGTTGGCGT TAACGGTGGC GAGCTGTTAG GCGAAATCGG TTTAGCGATT GAAATGGGTT GTGATGCTGA AGATTTAGCA TTAACCATTC ACGCTCACCC AACACTGCAC GAATCAGTGG GCTTAGCCGC TGAAATGTAC GAAGGTTCTA TTACTGATTT GCCAAACCCA AAGGCAAAGA AAAAGTAA
|
Protein sequence | MSNEIKTQVV VLGAGPAGYS AAFRAADLGL ETIIVERFST LGGVCLNVGC IPSKALLHVA KVIEEAKAVA AHGVVFGEPT IDLDKLRGFK EKVIGQLTGG LGGMSKMRKV NVVNGFGKFT GPNTLEVTAE DGTVKVVQFE QAIIAAGSRP IKLPFIPHED PRIWDSTDAL ELKEVPGKLL VMGGGIIGLE MGTVYASLGS EIDVVEMFDQ VIPAADKDVV RVFTKQIKKK FNLILETKVT AVEAREDGIY VSMEGKSAPT EAVRYDAVLV AIGRAPNGKS LDAEKAGVNV DERGFIKVDK QLRTNVPHIY AIGDIVGQPM LAHKGVHEGH VAAEVIAGMK HYFDPKVIPS IAYTDPEVAW VGLTEKEAKE QGIAYETATF PWAASGRAIA SDASEGMTKL IFDKDTHRVI GGAIVGVNGG ELLGEIGLAI EMGCDAEDLA LTIHAHPTLH ESVGLAAEMY EGSITDLPNP KAKKK
|
| |