Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_3963 |
Symbol | |
ID | 5755782 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 4667638 |
End bp | 4668645 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641290309 |
Product | AraC family transcriptional regulator |
Protein accession | YP_001556383 |
Protein GI | 160877067 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAAATA CGATGAACCA GAGTGAGATA GAAACAGCTT CAAAAGTGAC CATAGCCATA GTGGTCTTTG ATGGGATCAT TCCATTTCAT CTGTCAGTTC CCTATGAAGT CTTTGAAAAA GTGCTCAAGG CCGATGGCAC GCCCGCCTGC GAAATCACCA TCTGCGCCGC CACACCCGGA ATACTCAAAA CCAGCGCAGG CTTCTCGATG ATAGTAGAAA AGGGGCTGGA TGAATTAAGC TCAAAAGACA TCATCATAGT GCCGAGTTGG GATGATCCTG CACACGAGCC AGAAACCTGT ATTATTAATG CCTTGCAGCA AGCGCACGCC AATGGATCGC GCATCATAGG CCTGTGCATG GGCGCTTTTG TTGTGGCTGC CGCAGGATTA CTCGACGGAC GTTCCGCCAC CACCCATTGG CGCTGGGCAC AATGTTTCCG TAATCTGCAC ACGAATGTGT TTGTCGATGA GAAGGTGCTG TATATCGATA ATGGAGATGT GGTGACTTCT GCGGGCACTG CCGCGAGTAT TGATTGCTGC TTGTATATCG TTCGGCAAAT GTGGGGATCT GAAACGGCTA ACGCAGTCGC TCGCCATCTC GTTGTGCCAC CGCACCGCCA AGGTGGTCAG GCTCAATACA TAGATATTCC CGTTCCAGCC GTTAATCAGC GCGAGCCTTT ATCCGCTATC ATGGATTGGG CGATAGCAAA TATTGCATCG CCGCTGACGG TTGACACTAT GGCTGAGAAA GCCTGCATCA GTCGCCGCCA TTTTACTCGG CGTTTTCAAC AAGCCACAGG TACCAGCTTT TCACTCTGGT TGGTTAATCA ACGGCTTATT ATGGTGAAAC GATATTTAGA AACGACAGAC CACTCCATCG ACCGCATCGC CGAACAAGCC GGTTTCGCTT CCACTACCTC ACTTCGGCGC CATTTCCGTC AACAGTTTGA TATTTCCCCA TCGAATTACC GATTTGTATT TAGGGGAAAG AGTAAGGCTA GCGAATGA
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Protein sequence | MINTMNQSEI ETASKVTIAI VVFDGIIPFH LSVPYEVFEK VLKADGTPAC EITICAATPG ILKTSAGFSM IVEKGLDELS SKDIIIVPSW DDPAHEPETC IINALQQAHA NGSRIIGLCM GAFVVAAAGL LDGRSATTHW RWAQCFRNLH TNVFVDEKVL YIDNGDVVTS AGTAASIDCC LYIVRQMWGS ETANAVARHL VVPPHRQGGQ AQYIDIPVPA VNQREPLSAI MDWAIANIAS PLTVDTMAEK ACISRRHFTR RFQQATGTSF SLWLVNQRLI MVKRYLETTD HSIDRIAEQA GFASTTSLRR HFRQQFDISP SNYRFVFRGK SKASE
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